Conserved Protein Domain Family
DDE_Tnp_1_4

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pfam13701: DDE_Tnp_1_4 
Transposase DDE domain group 1
Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.
Statistics
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PSSM-Id: 493621
Aligned: 24 rows
Threshold Bit Score: 370.423
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015126936  15 FESVKSCPVVVNFNGETVTSDAGVTLIAELDRKREITSRLAGCFKDYREQNRIEHSVSSLIAQRVYGLVMGYEDINDHET 94  Calothrix sp. P...
WP_015747335   3 KSTGLYPSLRVDATGKRVVSHGGSVLLALAADRVGLGRGLSAALRPWRKP-MAVHDPGKILLDLAISLAIGGDCLADIAQ 81  Nakamurella mul...
Q5LW54        13 VRLGFDRRVRLEFHGSKISSDGGLLLFRELDEVLGLHDIARGVLRDTRTGHNRLHSIVGLLRQSVFGRLAGYEDVNDADR 92  Ruegeria pomeroyi
4_pfamImport   1 DRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSRTGKNTLHRLDGLFRQSVFGRLAGYEDVNDADR 80 
WP_004604210   7 VALDSNKKIKLNFNGGDLSSDAGLLLIKEFASKIGFNRLINNLFKIRDERSYFRHSDPDILMQSIYQTIAAYFKDDCADE 86  [Eubacterium] c...
CDD06664       7 LSLESNRQIKINFDGGDLSSDAGLLLIKEFVSKLDIDKLFSRSFKTNDSASFRYHTDKENLLQIIYMIIAGYFEDDASDE 86 
WP_014097406   7 KTLDFNHKIKLSNDGGSLSSDTGEFLFREFDEKIGFSKTLVKYLRLNDSRKYYLHSNENLLRQKVYQLIAGYAEDDAADQ 86  Heyndrickxia
Q9K5V1         7 LTLDFNRRIKLSTDGGSLSSDTGEFVFREFDEKIGFSDTLVQHLHLNDERKYYLHSNENLFRQKIYQLIAGYAEDDAADQ 86  Bacillus halodu...
WP_015076361   7 KHVKFNSKMVVSNTGGNLSSDAGLILVKEFMDSLGFYSFAKQFLHFNEDRIYWTHDNISLLEQLLFQLIAGYSADSSANL 86  Carnobacterium
1_pfamImport   1 NQVKFNSNITISHTGGRLSSDSGLVLVKELMNTFGFSHLAKQWLHITDHRAYFTHDNLAILEQLIMQLIAGYSADSSANL 80 
WP_015126936  95 LRHDVMFALSVGKsitsgqePVKMAGKSTLNRLEHCPEDVSNRAesryhriehdaeaIEKLLVEIFLESF-QKPPRQIVL 173 Calothrix sp. P...
WP_015747335  82 LRAEPAV-------------FGHVASDPTVSRLIDTLAPDATAAlkaidtaraaaraRAWKLAGPAAPNHdRSAKAPLVV 148 Nakamurella mul...
Q5LW54        93 LALDPVMQQVVGGra----vDTNAASASQMGRFETKVRATAEKRaal--------aeLSGQWIDRVHA---SAPPKWITL 157 Ruegeria pomeroyi
4_pfamImport  81 LALDPVMRQVVGGra----vEAQAASASQMGRFETETLALAANRaal--------adLNGQWIDRFHD---RNGLKYIVL 145
WP_004604210  87 LTNDPVFSAVLE--------KEALASQPTLSRFWNRMDEDTLKKld----------tIDSRMREIIYS---IKRPEMMVF 145 [Eubacterium] c...
CDD06664      87 LTNDPVFKAVLN--------KDALASQPTVSRFFNRMDEDTLNQfl----------tIGRILRKRVYS---IQMPQAVIP 145
WP_014097406  87 LTHDPVFKEIIE--------TPTLASQPSLSRFYTRFDKDSIEQln----------lANQEVLDKIHC---FRQSKELFI 145 Heyndrickxia
Q9K5V1        87 LTNDPVFTQVIG--------TNALASQPSLSRFYTRFDHESIEQlh----------hANQELLDKVHE---LRESKALII 145 Bacillus halodu...
WP_015076361  87 LKEDPIFRLVLD--------KEAIASQASLSRFWDRISEENIAQfq----------eLNQAMLDKVRM---ERNNTQMII 145 Carnobacterium
1_pfamImport  81 LRRDPVFQAVLG--------KKQLASQSSISRFLDRFTEENIDQlq----------aLNQSLIDKARL---IRNDTELII 139
WP_015126936 174 DLDVTDDLVHGNQEKSFFNPYYKGYCYAPLYIF------CGKHLLASKLRASNVDPAEEA-----LP-ELQRVIKLIRER 241 Calothrix sp. P...
WP_015747335 149 DVDATLVTAHSEKQLAAAT-FKKGFGFHPIGAWadhgpdGTGEPLAMLLRPGNAGSNTAAdhisvVKaALAQLPCTTADR 227 Nakamurella mul...
Q5LW54       158 DIDSSVCPTHGAQEGTAWNGHFGCICYHPLFVFn-----QFGHLECCALRPGNVHSADGW-----EE-VLKPVIARYADR 226 Ruegeria pomeroyi
4_pfamImport 146 DMDSSVSPTHGDQEGAAWNGHFDCTCYHPIFLFn-----QFGMLERCALRNGNVHSADGW-----RD-VLDPVIARYAGR 214
WP_004604210 146 DLDSTLLATYGKQEGEGFNFHYHAHGYHPLLCYd----gLTGDLLKAELRNGTQYCSNDA------DaFMIPLMKEFRDK 215 [Eubacterium] c...
CDD06664     146 DLDSTLLDAYGKQEGRAFNFHYQSNGYHPLVCYd----gMTGDLIKIQLRDGTQYSCTGV-----VD-FLQLILDEYLND 215
WP_014097406 146 DLDSTHSDTYGDQESSSYNTHYGTMGFHPLVAFd----gATGDFLKAQLRPGNVYTSNGV-----VE-FIRPLIKHYNEM 215 Heyndrickxia
Q9K5V1       146 DLDSTHADTYGQQEFTAYNTHYGTVGFHPLVAFd----gITGDFLKAQLRPGNVYTSNGV-----VD-FVEPLIKHYNEK 215 Bacillus halodu...
WP_015076361 146 DLDSTHSDTFGNQEKTEYNAHYGTQGYHPLVAFd----gLTGDFLKAELRSGNVYTSKGV-----KD-FLAPMLAHYCQV 215 Carnobacterium
1_pfamImport 140 DVDSTHSDTFGRQEQTDYNAHYQTYGYHPLVAFd----gLTGDFLKAELRSGNQYTSKGV-----KA-FINPLLHHYKST 209
WP_015126936 242 WSNVKILVRGDSAYSREDIMSWCESQiGVDYVFGLAQNSRLIQLSQSTKYRAFLEYSQKIETvveffetlftpsddlkkq 321 Calothrix sp. P...
WP_015747335 228 RPGRGVLVRTDGAGGTHEFVDWMARQ-RVQYSVGFTLTTDITAKVDALPEAAWTPAYNA--------------------- 285 Nakamurella mul...
Q5LW54       227 HLMR--FFWADAAFAIPGLYEALEAE-NCFYAIRMRANRILQGRIAHLLKRPVGRPPNHV-------------------- 283 Ruegeria pomeroyi
4_pfamImport 215 DLGGR-FFRADAAYAIPAIYMRLEEA-RFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKV------------------- 273
WP_004604210 216 YPSMPLYLRGDSGFASPAIYKACEDH-SCKYAIRLKENAKLRALAKFEDEALYNATRYNQVDy----------------- 277 [Eubacterium] c...
CDD06664     216 YPTIQILLRGDSGFATPDLYKQCEEN-GTSYVIRLKENGILREKASHLVDELDEITRNNKVDy----------------- 277
WP_014097406 216 FPETTLFLRGDSGFAVPGLYDLCEEE-SVLYIIRLKSNSQLQSLAKEYHPSSAPLDVSKT-------------------- 274 Heyndrickxia
Q9K5V1       216 FPATTPFLRGDSGFAVPALYDLCERE-SVYYVIRLKSNAILQRMADECHPATVPSDVTKS-------------------- 274 Bacillus halodu...
WP_015076361 216 LPCTDILVRGDSGFATPEVYDTCESN-GSFYVIRLKSNKVVEKLAESYVLVGDNHSWDER-------------------- 274 Carnobacterium
1_pfamImport 210 LPHTEILVRGDSGFATPEVYESCEAT-ESQYVIRLKSNRRLSQLAEHSVLYGDNQEWEER-------------------- 268
WP_015126936 322 atalvdsSVWYCSLDYKTFlS-------WSRNRRVVSKIEYSNEGVNT--RFV------VTSLPsk----kVPPGRLYtQ 382 Calothrix sp. P...
WP_015747335 286 -------DQEPRDGAWVAElTgvlklkgWPKDMRVIVRAERPHPGAQL--KFTdsngnrLTAFAtntkggqLADLELR-- 354 Nakamurella mul...
Q5LW54       284 -------RRIYGDFEYQSA-S-------WDKPRRVVAKVERHPGELFPriGFV------VTNLP-------MVPDWIV-H 334 Ruegeria pomeroyi
4_pfamImport 274 -------KRFFEDFEYQAA-S-------WDKPRRVIAKIEWHPGELFPkvGFI------VTNLP-------MEPDWVV-R 324
WP_004604210 278 -------AVVYGEFMYQAN-S-------WPHPRRVVYKIEKPANQMVHmyTFV------VTTME-------SEPYQIL-Q 328 [Eubacterium] c...
CDD06664     278 -------AVVYGDFMYKAG-P-------WPYERRVVCKVEKPENQMVYmyTFV------VTNMD-------SSPEYLI-K 328
WP_014097406 275 -------ETYYEETIYQAK-S-------WSKPRRVIIQSVRPAGELFFthSFF------VTNFEl------AFPQDIV-R 326 Heyndrickxia
Q9K5V1       275 -------ECYYEEIDYQAK-S-------WSKPRKVIIQSVRPAGELLFthSFF------VTSLGd-----iFSPKDIV-R 327 Bacillus halodu...
WP_015076361 275 -------EVHHYSAFYQAN-S-------WPQKRRICIKSTREANQLVFshEYV------VTNFHe-----eLSAKTIF-Q 327 Carnobacterium
1_pfamImport 269 -------EVQYFSLPYQAQ-S-------WSKPRRVCIRSVREGGELLFhhAFI------VTNLSd-----nVSPEVIF-S 321
WP_015126936 383 KYCPRGNIENCFKEQKLELKSDRTSTHTFAGNQLRLWFTSIAYILMNALReKCLAKTELQNAQVGTIRTKLLKLGAIITV 462 Calothrix sp. P...
WP_015747335 355 -HRRRARCEDRIRNAK-DTGLNNLPLNDFAQNQVWIAVVQLATELTAWMQmLAFTGTPARTWEPKKLRHRLFSVAARIGR 432 Nakamurella mul...
Q5LW54       335 FHNQRGTAEQRIKEGKQAINWTRLSCKGLAQNEVRLQLHALAYNLGVFLQgADLP-EEVAEWSLTSLQTRLIKIGARVVR 413 Ruegeria pomeroyi
4_pfamImport 325 FYNQRGTAEQHIKEGKYAFRWTRLSCRKFRHNEVRLQLHALAYNLATFLRcIELP-EAMADWSLTSLQLKLIKIGARVVR 403
WP_004604210 329 FYCGRGKMENFIKEGKGGFDFSSVSSHSKTVNANRLRIHALAYNLFNWFRrLVLP-ASMRKQRVDTIRLKLLKIAARVIR 407 [Eubacterium] c...
CDD06664     329 FYCKRGRMENFIKESKSGFDFASVSSHARIVNANRLQVHALAYNIFNWFRrLALS-ANMRKQRIDTVRLKLLKIAAKIIR 407
WP_014097406 327 AYQKRGTMENYIKEAKNGFYFDHMNSHAFLVNEVKMMLTLLAYNLTNWLRtLCFP-EGQKTMQIDTIRTRLIKAASKVVK 405 Heyndrickxia
Q9K5V1       328 TYQKRGTMENYIKEAKNGFYLDKMSSHSFQVNEVKMMVSLLAYNLTNWLRtLCSP-EAQKGMQIETIRTRVIKVASKLVK 406 Bacillus halodu...
WP_015076361 328 IYHKRGTMENFIKEAKNGFYFDKTDSSSFLENHARMMVSLLAYNLVNFMKtICLP-EKEATFQVDTLRLRLFKVSGKLVH 406 Carnobacterium
1_pfamImport 322 LYGKRGTMENFIKEAKGGFYFDKTDSPRFLENHVRMMISVLAYNLVNFLKsIGFD-KVNQGMTIHSIRLILLKVAGKLVQ 400
WP_015126936 463 SRRRVLIAISNAYPYKEIFATAYnylSRLKC 493 Calothrix sp. PCC 7507
WP_015747335 433 KARRTWLRLSAHAPHRDLLLHGLarlRNLPQ 463 Nakamurella multipartita
Q5LW54       414 HARAIKFQLAEVAASGDRFRLILtaiQRLRA 444 Ruegeria pomeroyi
4_pfamImport 404 HARAITFQLAEVAVTGPMVRAVLaaiRRLRT 434
WP_004604210 408 SARYITFKLCGGCPYKREYHETLsniQQLSV 438 [Eubacterium] cellulosolvens
CDD06664     408 SARYITFKLCSSCPYKNEFYETLsniGKLNV 438
WP_014097406 406 SGRSLYFKLSSSFVYQNFFWDVLnriQKLQL 436 Heyndrickxia
Q9K5V1       407 SGRSLYFKLSSSFVYQDFFWKVLqriQQLKL 437 Bacillus halodurans
WP_015076361 407 SGRRLLLRMSSYHVYQDLFYQLLdkiQQLSW 437 Carnobacterium
1_pfamImport 401 TGRQVYLKLSSYHVYQTEFYKVFerlRRSKQ 431
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