Conserved Protein Domain Family
GDPD_2

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pfam13653: GDPD_2 
Glycerophosphoryl diester phosphodiesterase family
This family also includes glycerophosphoryl diester phosphodiesterases as well as agrocinopine synthase, the similarity to GDPD has been noted. This family appears to have weak but not significant matches to mammalian phospholipase C pfam00388, which suggests that this family may adopt a TIM barrel fold.
Statistics
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PSSM-Id: 493581
Aligned: 20 rows
Threshold Bit Score: 32.1061
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002113023 177 SAGAW-TIYKmtlsekelkasDTLINQMIGWGLQRLITDDTD 217
Q6MRA8       253 RIFLG-PIEN-----------EAQLADATRYKAEGLITTNLP 282 Bdellovibrio bacteriovorus
WP_015810884 221 PFRFWaSPDN-----------INAWKVLMNLGADYINTDHVA 251 Dyadobacter fermentans
WP_015814264 220 KVRIWaTPDN-----------INSWKTMMALGVDYINTDKVQ 250 Dyadobacter fermentans
EEC17645      67 KVYFW-TTDS-----------KTTIRKVLRLGVDGIITNHPE 96 
EEC13540     213 KVYHW-TIDL-----------SSAIRSSIRMGVDGIITNYPE 242
EEC10830     226 KAYFW-TTDL-----------KSTMREVLRLGVDGILTNKPE 255
XP_002503868 311 HVVSW-VVDD-----------EATLGAQLALGVSGVITNEPG 340
WP_011755990 183 VVMTW-PIDD-----------LEWLDRVVGLGANGVITNEPE 212 unclassified Nocardioides
WP_012993899 197 GLSVW-TVDE-----------SQAISEFWQMGVFNLTTNKVT 226 Mageeibacillus indolicus
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