3NPD


Conserved Protein Domain Family
QSregVF

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pfam13652: QSregVF 
Putative quorum-sensing-regulated virulence factor
This is a family of short ~14 kDa proteins from Psuedomonas. The structure of a secreted protein has been solved and deposited as PDB:3npd. It comprises one structural domain with five beta-strands and five alpha-helices. Various comparative structural prediction methods plus its genomic location point to the protein forming a functional dimer with its adjacent genomic partner, in pfam12843. Together these might be regulated by the other product from the PotABCD operon, namely the putrescine-binding periplasmic protein. which has been implicated in quorum-sensing. QSregVF is certainly up-regulated in quorum-sensing, and is predicted to be a virulence factor.
Statistics
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PSSM-Id: 493580
Aligned: 7 rows
Threshold Bit Score: 191.213
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3NPD_A         3 SLKDFELSKXLEKVAKESSVGTPRAINEDILDQGYTVEGNQLINHLSVRASHAERXRSNPDSVRSQLGDSVCSNTGYRQL 82  Pseudomonas aer...
WP_013790436  22 SLNDYQLTKTLEKVAKESSVGTPRAINEDILDRGYTVEGNQLINHLSVRPAHGAQMRSNPDTVRAQLTNSVCSNPGFRKL 101 Pseudomonas
1_pfamImport   2 SLQEQQLSQLLDQVARESNVGTPRAINEDILDQGYTVENNQLVNHLSVQPRHAAQMRDNPADVRSQLAVSVCGNEGLRKL 81 
Q9HY15        21 SLKDFELSKMLEKVAKESSVGTPRAINEDILDQGYTVEGNQLINHLSVRASHAERMRSNPDSVRSQLGDSVCSNTGYRQL 100 Pseudomonas aer...
Q87XZ0        23 SKQDFELSKMLEKVAKESSVGTPRAINEDILDQGYTVSGNQLINHLSVREGQAQQMRANPDVMRNQLGNSVCHNNGFRQL 102 Pseudomonas syr...
Q88ME0        23 SKQDYDLNTLLQKVAKESSVGTPRAINEDILDQGYTVEGKALVNHLSVRQSHAARMQANPEQVRSQLGDSVCRNNGFRNL 102 Pseudomonas put...
WP_016494357  21 SLKDYELSKMLEKVAKESSAGTPRAINEDILDQGYTVQGNELVNHLSVREAHAAQMRANPDAVRAQLGASVCRNTGYRQL 100 Metapseudomonas...
3NPD_A        83 LARGAILTYSFTEYKTNQPVATERFDAGSC 112 Pseudomonas aeruginosa
WP_013790436 102 LASGAVLRYEFSEIQSNRPITTEQFGKADC 131 Pseudomonas
1_pfamImport  82 MSQGAVLRYDFSEYQSNKPIASERYTAADC 111
Q9HY15       101 LARGAILTYSFTEYKTNQPVATERFDAGSC 130 Pseudomonas aeruginosa
Q87XZ0       103 MTKGAVLKYQFTEYKTNRPVATQTFQASDC 132 Pseudomonas syringae pv. tomato
Q88ME0       103 MSKGAVMVYRFTVYKTNQPVMDQAFDNASC 132 Pseudomonas putida KT2440
WP_016494357 101 LARGAGLRYEFSEYKTNRPVSSERFTARDC 130 Metapseudomonas resinovorans
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