Conserved Protein Domain Family
Methyltranf_PUA
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pfam13636: Methyltranf_PUA (This model is not part of the current CDD release)
RNA-binding PUA-like domain of methyltransferase RsmF
Methyltranf_PUA is the second of two C-terminal domains found on bacterial methyltransferase RsmF that modifies the 16S ribosomal RNA. It has some structural similarity to the RNA-binding PUA domains suggesting that it is involved in RNA recognition. It lies downstream of the catalytic centre of this methyltransferase, family pfam01189.
Links
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Statistics
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PSSM-Id: 493565
Aligned: 85 rows
Threshold Bit Score: 44.4401
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_015254362 458 ALKYLKGETLPLEPerlNLrpvedgrqpdeaGYALVCIDGYPVGWGKLRDGLLINERAPGWRW 520 Thermobacillus composti
2_pfamImport   1 AVKYLKGETLTGDT---GMsap------cekGWVLICTGNVSLGWGKMAAGTIKNHYPKGLRW 54 
Q189A0       387 ILKYLKGDVVNSND---SR------------GWVLVSVEGIPLGWGKESSGVIKNHYPKGLRK 434 Clostridioides difficile 630
CDE55797     418 TSMFFNGETINCDT---QK------------GWCLVCIEGFSAGWGKASGGILKNHYPKGLRK 465
CDF46905     445 TVGYLNGQTLTCDDa--NLp----------kGWYLITVDGYSLGWGKLAGQIMKNHYPKGLRK 495
Q1WTC3       404 WAEYVAGNIIFLSG---NTrk---------nGWYLLRCEEKNFAFGKLVNGTIKNFFPKGLRF 454 Lactobacillus salivarius UCC118
1_pfamImport   1 WALYVHGETFELTS---APv----------aGFRVLTCDGLPVGFGKIVAKTVKNFFPKGLRF 50 
WP_014081971 395 WKLYVHGDTIPTDS---NLe----------kGWYLLICDGMSIGFGKVVSGTIKNFFPKGLRF 444 Fructilactobacillus sanfrancisce...
WP_014215491 400 WKQYVHGDTIDLET---NQak---------nGWVAVCVDDTIVGPAKLVNGTLKNFYPKGLRM 450 Pediococcus claussenii
CDA92453     400 AKKYIHGETVDCEF---DK------------GWCTVTVNGCPIGGAKAVNKTAKNHYPKGLRT 447
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