Conserved Protein Domain Family
Gluconate_2-dh3

?
pfam13618: Gluconate_2-dh3 (This model is not part of the current CDD release)
Gluconate 2-dehydrogenase subunit 3
This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.
Statistics
?
PSSM-Id: 493549
Aligned: 138 rows
Threshold Bit Score: 58.8457
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_015322067  59 EQGQIVQDMANRIYP-S------------------DDn------gPGAPEAGVVYFIDRQMNQdwgqgerwymegpfpgv 113 Natronococcus o...
Q2G3H3        40 SQVALVAAVADTMIP-Rt-----------------DT--------PGAVDVGVPKLLSALLAN----------------- 76  Novosphingobium...
WP_012029846  51 SEFLLLEAIAARIVP-Qp---------------------------STRPPIPVAALVDRKLHGdiad------------- 89  Bradyrhizobium ...
Q1QG31        48 DEFLTVVAAANRIVP-Qp---------------------------PTRSAIPVAALVDRKLHLaqsd------------- 86  Nitrobacter ham...
WP_012406398  48 EQWRTLRALCAVIIP-Qa---------------------------DDERAVPLAALVDRKIAKgksd------------- 86  Paraburkholderi...
WP_013829989  76 AEEPTLRAFCDIVLA-Q----------------------------DEDPRVPVAEFIDDKLADgrld------------- 113 Mycolicibacter ...
Q740G5        76 EEEPCLRAFCDTVLA-Q----------------------------DVEPRVPVAESVDAKLADgrld------------- 113 Mycobacterium a...
WP_013427628  55 PEAAIAGRLLDLLLA-Q----------------------------DGEPRVPVLALVDGRLAAgetd------------- 92  Pseudofrankia i...
WP_015748835  55 PERAIAEPLLDLLLA-Q----------------------------DAEPRVPVLALIGTRLAIgetd------------- 92  Nakamurella mul...
WP_015201571 171 wEFDIVARLVDHILPfRtqegenflnryynflgkqDKqvqyayayRLDESVGAANFIDNILARe---------------- 234 Crinalium epips...
WP_015322067 114 eqldldtgveeatpiggpvggegvgepaehdgadegdghdaddgedeieddeaaeeveeqegdpgepeeddvevewagee 193 Natronococcus o...
Q2G3H3           --------------------------------------------------------------------------------     Novosphingobium...
WP_012029846     --------------------------------------------------------------------------------     Bradyrhizobium ...
Q1QG31           --------------------------------------------------------------------------------     Nitrobacter ham...
WP_012406398     --------------------------------------------------------------------------------     Paraburkholderi...
WP_013829989     --------------------------------------------------------------------------------     Mycolicibacter ...
Q740G5           --------------------------------------------------------------------------------     Mycobacterium a...
WP_013427628     --------------------------------------------------------------------------------     Pseudofrankia i...
WP_015748835     --------------------------------------------------------------------------------     Nakamurella mul...
WP_015201571     --------------------------------------------------------------------------------     Crinalium epips...
WP_015322067 194 paegqgwqQPLTP-AEAYTYS----IDFVEAYCEAEYD-ESFVDLDGDEQDEVIEALQND-EV-GTFRGLEPSD---FFG 262 Natronococcus o...
Q2G3H3        77 --------WAAPAtRTALLGQ----FDAIDVAARGAKG-KPFAALKPADRLAVLKAYDAAsFTqAD------------YK 131 Novosphingobium...
WP_012029846  90 ----gyrtDGMPRhREAWRRG----LHALEAEALAAFQ-RPFVELSEATQDELLRHAEAGaL---KAADWGDMRcdgFFK 157 Bradyrhizobium ...
Q1QG31        87 ----gyrpPGTPRdGDAWRLG----LKALDAETRAAFD-APFHILLEADQDVLLQRMQKGeL---RNPAWTEMTsdvFFR 154 Nitrobacter ham...
WP_012406398  87 ----gyrhARLPAlQDAWRIG----LAALNDESMHRHR-AAFSDLAERERIGLVQALEHGtL---SRDTWQGMPpqlFFT 154 Paraburkholderi...
WP_013829989 114 ----gyqyADMPDdGDTWRLV----LQGLDEAAEQRYGrASFADAEVPSQLALVEQFSRGgL---YGGAWSQLNesrAWS 182 Mycolicibacter ...
Q740G5       114 ----gyqyADMPDdRDTWRLV----LRGLDETASRRYGaGSFAAAEPQTREAIIEEFSRGeL---HGGSWDSLNvkrAWS 182 Mycobacterium a...
WP_013427628  93 ----gwhyDDLPQdAQAWRDT----LGFLDADARDAHG-LGFAELDEPAQAAIIQAVQDRtR---DGQDWHRWAaarSWS 160 Pseudofrankia i...
WP_015748835  93 ----gwhyDDLPEdGQAWRAT----LKFLNRDAGDRHG-GPFSRLRPAQQAGLIQAVQDLaQ---RGKTWHDYPasqVWS 160 Nakamurella mul...
WP_015201571 235 --------------ENHHLVDykicLGQISRILRQR---NPYVEPKDVSKELYIDLYDEMaINkVNGWNYQEYQeprFFL 297 Crinalium epips...
WP_015322067 263 L-LRANTLEGMFADPMYGGNQemIG 286 Natronococcus occultus
Q2G3H3       132 R-LRGLILILYYNSEPGATVE--LR 153 Novosphingobium aromaticivorans DSM 12444
WP_012029846 158 RrLLHDIVLAYYAHPTAwseigwgg 182 Bradyrhizobium sp. ORS 278
Q1QG31       155 MrLARDIVLAYYAHPTAwseigwgg 179 Nitrobacter hamburgensis X14
WP_012406398 155 QrVLHDICTTFYSHPSSwsaigfgg 179 Paraburkholderia phymatum
WP_013829989 183 V-CMRMALTAFYSHPWAwneigfgg 206 Mycolicibacter sinensis
Q740G5       183 V-CMRMTLSGFYSHPWAwneigfgg 206 Mycobacterium avium subsp. paratuberculosis
WP_013427628 161 L-WTRYACTAFYSHPWAwneigfpg 184 Pseudofrankia inefficax
WP_015748835 161 L-WTRYACTAFYSHPWAwneigfpg 184 Nakamurella multipartita
WP_015201571 298 ElLRRHTFTGAFSHPKYGGNVggTA 322 Crinalium epipsammum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap