Conserved Protein Domain Family
HTH_34

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pfam13601: HTH_34 
Winged helix DNA-binding domain
Statistics
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PSSM-Id: 493535
Aligned: 17 rows
Threshold Bit Score: 89.637
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2FR95        23 VRLELFWSLSDlgDDGATARQLKSALNLNDGAIYSNLKKLEILGYLKCELVLFEGKELELWSMTLEGLEEWKKVKKWLCR 102 Methanospirillu...
WP_011585942  16 LRLGIMSILIT--NDWIEFNTLKELLEATDGNLASHITALEKINYLEVRKAFIGKKPNTSFRITKEGRKAFKDHIDALEQ 93  Cytophaga hutch...
WP_015792695  14 TRLSLVAFLAA--TDWADFAVLRDSVELSDSALSKQLTTLADAGYIEIRKAFVGKRPRTSARLTPAGRTAFDGHVLALQQ 91  Catenulispora a...
WP_012850473  16 VRFAVMATLAA--ADRAEFAFVRDTVEITDSALSKQVSTLEKAGYVKVTKGYVGKRPRTWLSLTPAGRSAFASHCAALRE 93  Thermomonospora
WP_012948676  17 VRFSLLAGLAQ--ADELEFRFLRDTLQISDSLLSRQASTLEQAGYIAIRKGHVGKWPRTWLKLTPEGRAAFNDHLNTLRE 94  Geodermatophilu...
1_pfamImport   1 VRLGIMAILMV--NEEADFNFLKEQLSLTDGNLASHTRALEELGYIVCNKSFVGRKPRTVFQATPQGREAFKSHIEALEK 78 
2_pfamImport   1 LRLAVMSILVS--VEEAEFSYLKQQTGATAGNLSVQIDKLNKAGYVEVIKTFKGKMPCTICKITLKGLEAFEEYVDALKS 78 
3_pfamImport   1 LRLAVMSILLG--VEEADFVFIREQTGASAGNLSVQIDKLQKAGYITVEKTFRGKIPRTLCRITPTGVDAFEEYVEALKS 78 
Q7MSY5         4 LRLAIMSVLMS--VEEADFLYLKEVTGATSGNISVQLDKLSTAGYIEIEKGYNGKRPRTTCRATDAGREAFSAHFEALKS 81  Porphyromonas g...
WP_009419679  13 LRLAIVSLLVS--EEKADFARIKEITKATSGNISVQIQKLETAGYITVKKSFKDNYPNTEVQLTKEGLLAFERYVEALKS 90  Capnocytophaga
Q2FR95       103 LL 104 Methanospirillum hungatei JF-1
WP_011585942  94 LI 95  Cytophaga hutchinsonii
WP_015792695  92 IV 93  Catenulispora acidiphila
WP_012850473  94 IV 95  Thermomonospora
WP_012948676  95 IV 96  Geodermatophilus obscurus
1_pfamImport  79 FL 80 
2_pfamImport  79 YI 80 
3_pfamImport  79 YI 80 
Q7MSY5        82 YL 83  Porphyromonas gingivalis
WP_009419679  91 YI 92  Capnocytophaga
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