Conserved Protein Domain Family
DDE_Tnp_1_2

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pfam13586: DDE_Tnp_1_2 
Transposase DDE domain
Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.
Statistics
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PSSM-Id: 493523
Aligned: 7 rows
Threshold Bit Score: 106.377
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012161164   371 VHADQIYRTRANRRWCKARGIRLSGPPLGRPQQdpqvqtqLKQQACEDEKVRVQIEGKFGQAKRRFGLNRVMAKLADTAA 450 Acaryochloris...
WP_015957362   364 VHVDRIYRTRENRAWCKARGIRISGPQLGRPPKnis--kqEKKQALDDECFRNAIEGKFGQAKRRFSLKLVMTKLPETSE 441 Rippkaea orie...
wustl:cce_5076 347 VHADRIYRSKANKDWCKQRGIRLSGIGLGRPPKnis--qeERKQTRIDEAFRNRIEGKFGQAKRKFSLDLVKTKLKETSE 424
BAF58569       375 VLADQLYRTRENLSFCRKHGIRLSGPPLGRPLLdg---rqEKKIARQDMRERNAIEGGFGVCKRRYGLARIMARLKETAE 451
Q82T99           1 MCRCRLHWCSHTLESIEEHGCTAHVKGRGQQAK-------EKRRHPGAHARRWIIEVSHGWFNCLRKLLMRYEKLARSFL 73  Nitrosomonas ...
WP_015929591    36 VAVDRGYTSYRFRLHLWRLEARAAIPPQHHEA--------PVACLRRIDINSSRVDRLWARLKERRAMATRYEKTASSFL 107 Methylobacter...
jgi:Aazo_4262   62 LWVDSGYDGDKFALAVWFL-IQAHVEVIGPTEQ-----------EFKVLPQPWVVERTFGWFNQYHRLSKDYERLTQIRE 129
WP_012161164   451 SAIAITFLVMNLE 463 Acaryochloris marina
WP_015957362   442 TSIAITFLVVNLG 454 Rippkaea orientalis
wustl:cce_5076 425 TAIAMTFLVVNlc 437
BAF58569       452 SVIALQFLVMNLE 464
Q82T99          74 GLNHLAAAIIAFR 86  Nitrosomonas europaea
WP_015929591   108 RVICLTATIDWLK 120 Methylobacterium nodulans
jgi:Aazo_4262  130 GAIYAVMTRIMLL 142
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