Conserved Protein Domain Family
OMP_b-brl_2

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pfam13568: OMP_b-brl_2 
Outer membrane protein beta-barrel domain
This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.
Statistics
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PSSM-Id: 493507
Aligned: 33 rows
Threshold Bit Score: 57.8023
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011586774    24 SQf-S----------------FGVGTTLGLGYlr--sSQLKQGaqvi--------kdqNPsiENL----DY---KV---- 65  Cytophaga hut...
jgi:Poras_0219   9 AQ--Tarpmtrp---yadhrrFNWGFHVGVHV-----EDLIIDnlg---------pteGE--AQTlyaaVP---SY---- 60 
WP_009228318    22 YQvvQnrpyt-------dlrtFHFGVTLGTHV-----QDIELKnvgpqnilypdgttkNSniLVE----QD---RW---- 78  Prevotella sp...
1_pfamImport     2 AQw-PfgkekirnldnfdksrLSWGYTLGFNS-----YDFDF-----------------DykNQTed-iIV---EK---- 50 
WP_013304561    20 AQf-Nekpvlnk--enedkafLNWGYFLGFNQ-----YDFKF-----------------DykNDT----KDilvNK---- 66  Maribacter sp...
3_pfamImport     1 AQ--Sfmrf--------edkaFNFGAKVGFNAtfpviNSLSIN---------------GKeaENI----DI---EY---- 44 
WP_011585873    19 AQ--Lsa------------gmVAVGLTSAITA-----NKTSN-----------------EynFN-----------Sgnpn 51  Cytophaga hut...
WP_011963405    18 SQ--Dri-------------yIAAELEGGFLI-----THYKSQsp-----------slSSivNEK----EK---NH---- 55  Flavobacteriu...
WP_015782314    19 SQ--T----------------A-IGVKLNNPL-----ATVSVItpk----------taNEsyNIE----YF---GH---- 53  Capnocytophag...
WP_015782169    19 SQ-------------------VAIGVRFSYPF-----TMIQSMrpv---------tpnVPssSVS----FG---KF---- 54  Capnocytophag...
WP_011586774    66 ---------RASAQIGFqgVVQYRFAHQWC--VV--ASPGFNLFRSTFNNI-FI-------SND-----Tvsgseyithk 119 Cytophaga hut...
jgi:Poras_0219  61 ---------SPGFSVGV--IANYNPHIDWS--IRvlPTLHFGEQRLLFRTWeET-------GDE-----A---------- 105
WP_009228318    79 ---------DAGFHVGV--LGELRLSTHFQ--LRvaPTMYFGTRHLILRNEqEH---------------Diig-----km 125 Prevotella sp...
1_pfamImport    51 ---------SVGFNVGL--LGNLRLNDYLDlrLE--PMVAFSSRNLIFPFAgE---------DD-----Q---------- 93 
WP_013304561    67 ---------SLGFNVGL--IGEMRINEFLDarLE--PGLLYNSRELGFPG--FL-------E-E-----K---------- 108 Maribacter sp...
3_pfamImport    45 ---------KVGYLAAV--FCRVNIERFF---LQ--PSFSWHRSEGNIRFSipqslpennmlsNts--aT---------- 96 
WP_011585873    52 kyyseyvvkQSTFNVSP--SVSYFLSNRFA--VG--AQVGYVGYANTTETTdKY---------NalpltD---------- 106 Cytophaga hut...
WP_011963405    56 ---------NIKISASV--ILE--WDNKMS--FE--AGIAQNMRQWNILGKk----------PN-----S---------- 93  Flavobacteriu...
WP_015782314    54 ---------SGVFNTGV--FFRLPLKTHWV--FL--PEVMYKREAIPFRPEgSD-------L-K-----L---------- 95  Capnocytophag...
WP_015782169    55 ---------RNYLNAGG--FIRIPVQERLT--FQ--IEGMFSIAEVDFDGKy----------QG-----S---------- 94  Capnocytophag...
WP_011586774   120 vLSTATFKSTQLVLPILAKYYI--IPD--KNYFATAGIQFAYNTG-MRlSSRedsitsyynetdliasnkvdidynkvkV 194 Cytophaga hut...
jgi:Poras_0219 106 -FESMPMRTSQIELPLLVKYSS--VRFndTRPYLVGGVYGLLNMG-QK-KGA---------------------------P 153
WP_009228318   126 iEQRQELKTAYISTPTELIFAA--KRVnnHRPYILLGFNPMINLS-GKeSd----------------------------Y 174 Prevotella sp...
1_pfamImport    94 -DRLREVKSTYVHIPLLLKVST--KRLnnWKPFIVGGLSTAINLS-SNqDNPddnsvg---------------qfrmtnN 154
WP_013304561   109 -DAIREVKSTYINFPVLLKVST--RRFanWKPFLIGGASTSLNLG-SNeTSLddn---------------------sggT 163 Maribacter sp...
3_pfamImport    97 -TDLLMMKTSSLEVPIMVGYNL--VKKgpYGLSLMVGPKLKYNYK-IAyTVEsstt-------------------hveyV 153
WP_011585873   107 -YSYTKTTSAGISVMPYVTYYIplNDS--NKVYFFVKGSYNFQNStGKtSGYtettsydgsgn-----vtnvvrsdeygP 178 Cytophaga hut...
WP_011963405    94 -TLEVKQTQYFPSVFVGGYYDIp-FNAsnTNLRFYIGSKLSADFL-NYnSLNktdgtdl--------------dnvnsvT 156 Flavobacteriu...
WP_015782314    96 -SDRHFIRFDCLEVPLLLQIEG--KKK--FRGFGQIGVAPKFLLL-SSySEKqyse-------------------kydiT 150 Capnocytophag...
WP_015782169    95 -SFHSGYRFVHFDMPFLLQYEG--KRP--IRGFVQTGFSPKFYLM-REvS-Ldssyd-----------------isfadT 150 Capnocytophag...
WP_011586774   195 DGYKP--FQAHLILGVGTSvltgYRR---N---LD--L---QLSYYIPLTSSH 234 Cytophaga hutchinsonii
jgi:Poras_0219 154 LQFAP--LSAGWTFGVGCD----IYLryfK---LS--P---ELRFDFGFTDLI 192
WP_009228318   175 IKLKR--YDAFAEIGIGCD----FYL---P---FF--KlrpELKFMYSLINSI 213 Prevotella sp. oral taxon 299
1_pfamImport   155 SYYYE--VGFGIDLYLYY------F----K---FT--P---SIRGVFALNDEL 187
WP_013304561   164 FRMKK--WVYNYELGFGID----FYLqyfK---FT--P---SIRGVFAISDEL 202 Maribacter sp. HTCC2170
3_pfamImport   154 NDNTP--FGVNIATGVGVS----IG----R---LF--F---DFVYEFGLNQV- 187
WP_011585873   179 NKTNT--IGMQLGISPGLL----FMPg-kK---IGieF---SLGNLLGINSTI 218 Cytophaga hutchinsonii
WP_011963405   157 EESNK--FAFNVIPEIGIKg--rFKN---Gn-iWL--F---GIKYCHPLSKNI 196 Flavobacterium psychrophilum
WP_015782314   151 SHFNSvvMNLHLGGGVMWE----FPKi--I---LT--V---DGRFSTNLSPLT 189 Capnocytophaga ochracea
WP_015782169   151 RRFKK--SLLMWHIGAGIL----FER---KhwiFT--L---DHRFSMSVFNVS 189 Capnocytophaga ochracea
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