Conserved Protein Domain Family
Phage_tail_terminator_5

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pfam13554: Phage_tail_terminator_5 
Phage tail terminator protein
The three-dimensional structure of NP_888769.1, PDB:2L25, reveals a tail terminator protein gpU fold, which suggests that the protein could have a bacteriophage origin.
Statistics
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PSSM-Id: 493493
Aligned: 14 rows
Threshold Bit Score: 111.314
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_025413549  11 ALRAALGARL-DAALQAstlgalagcAVQSEGLR-FTRPTGR----PWIRGTLRVGGTVPDTIG--PHARLTTVGLWLVD 82  Gemmatirosa kal...
WP_015931526   5 TVMAAVKARLdETWTRC---------PVVYPNTKgNTPKDGS----RYLAVSYPLASSQPITVGspGSTLYRETGTFRLV 71  Methylobacteriu...
WP_015930599   5 TVMAAVKARLdETWTRC---------PVVYPNTKgTTPKDGS----RYLAVSYPLASSEPITVGspGSTVYRETGTFRLV 71  Methylobacteriu...
Q7VTX6         5 LIRAAFEKRL-KDWAKArtp----elAVAWQNIN-FTPPSNA----VYLRAYVLPAATISRDAA---GDHRQYRSLFQVN 71  Bordetella pert...
1_pfamImport   1 RITALLEKRL-GEWAAIkg------iPLAAENVS-FDDTGTM-----YLQSHVMPATTDAIDLA---QVSRVFRGVYQIN 64 
WP_015830281   5 NIRKAFEKRL-LALDta--------fATAWPNVE-FDPVLGV----PYQKPSLLPAAPENPTLG---DGYYREVGVFQVL 67  Methylovorus gl...
Q1GIH2         7 DIHAALMAQA-ETItg---------yAMLWPQKG-GDQPIGE-----HIRVSHVPNDNAPADLS---SDVMERQGFLYLT 67  Ruegeria sp. TM...
WP_012205911   8 SIWLALKSRI-DTLPLa--------yPRAWPGQT-FQVPSSGglpqPYLRVGRVSADPVRLFLG--DGEPHRRTGSLMVT 75  Delftia acidovo...
WP_015930111   9 RIYDALVWYV-SQQTFDpa------lRVAMPGVA-FTPEQGK----PFLAVDYFPNTSRLDGLP--FDSDVTHLGLFQLS 74  Methylobacteriu...
WP_015932623   9 QVLDALLGYL-AGLTFDpa------lPVAQPGVA-FAPQTGK----PYLAASFHPNTAGLDGLP--FDSDRTHVGLFVLT 74  Methylobacteriu...
WP_025413549  83 VFTPANTGTADSDTLADAVVLAFppgldlalpnaqAADGVLRLTGASRGGAIPDA----AGWLMAPCTVSW 149 Gemmatirosa kalamazoonensis
WP_015931526  72 LHVERGVGVDEGAAWMDELAAHF------------RGLTVGHFRCYGPTSPAHDDrndlGNYYALSISVPY 130 Methylobacterium nodulans
WP_015930599  72 LHLERGLGVDEGSAWMDELAALF------------RGLTVGHFRCYGPTSPAHDDrndlGNYYALSISVPY 130 Methylobacterium nodulans
Q7VTX6        72 VVMPIGAGSRAAEQIQAELDALFqvnl-----impSGGLAVRVRTPISSGQPTTG----DADHTVPISLGY 133 Bordetella pertussis
1_pfamImport  65 INVKAGGGKSKSHIIAAELIELFnlnt-----eltDGVVTCYINSVPSQFPSITN----GISYTTPISMSY 126
WP_015830281  68 LYYPLGDGPDNADLKALAIKNHFpral-----kmtEAGQVIQVMLTPTIAPGFES----MERWCIPISINY 129 Methylovorus glucosotrophus
Q1GIH2        68 LVSDLGQYEAVTKRKAGEIAAYFkrgq-----rltSNGTTVKITGH-TVRPGRQE----GGRWETPIRISY 128 Ruegeria sp. TM1040
WP_012205911  76 LVHPLGQAVAVYDQIAAGIAAHFvdgt-----emaYGDLVITVRDYPHVQEGYED----TGYWSVPVRIPW 137 Delftia acidovorans
WP_015930111  75 VVWPAGQGFVKPLQVAAQVRQAFaagt-----rlwRNDLTVCIDETPEVAGPIDD----APWVRFPVTVRW 136 Methylobacterium nodulans
WP_015932623  75 VVWPTGQGLLKPLDVAAQVRRAFpagt-----rlwRNNLVVCVDEVPQVDAPIDE----APWVRIAVTIRW 136 Methylobacterium nodulans
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