Conserved Protein Domain Family
HTH_29

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pfam13551: HTH_29 (This model is not part of the current CDD release)
Winged helix-turn helix
This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.
Statistics
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PSSM-Id: 493490
Aligned: 53 rows
Threshold Bit Score: 28.8543
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Pnap_4506  32 NALILLNCDQAGSrterprTCDIAAMLCVSERKVDRIKKKFVLEGLALTLNrQPs-KCEYDLLIDGRLEA 100
WP_012226986    9 RAKVGLLELSKQLg----nVSQACKMMGYSRDSFYRFKELYDKGGEIALQE-LSrrKPLLKNRVEPAVEQ 73  Gluconacetobacter diazot...
WP_015931497    9 RAKLGLLELAKQLg----nVSQACKLMGYSRDSFYRFRELYETGGEVALQE-LSrrKPLLKNRTAPEVEA 73  Methylobacterium nodulans
WP_005867787   10 NKLGLLELSQQLGn-----VSRACKIMGYSRDSFYRFKELYEQGGEIALQEiSRrkPVIKN-RVEEHIEQ 73  Bacteroidales
Q2Y940         11 HKVGLLNLAAELg-----nVSRACKVMGFSRDTFYRYQSAMENGGIDALIDaNRrkPNPKN-RVEEAVEM 74  Nitrosospira multiformis...
3_pfamImport    1 HKAGLLNLAEELSn-----VSKACKIMGVSRDTFYRYRELVAEGGVDAQINrSRraPNLKN-RTDEATEQ 64 
WP_012764065   11 HKAGLLNLAEELGn-----VSKACKVMGVSRDTFYRYRELAEQGGVDALINrSRrsPNLKNR-TDAATEQ 74  Musicola paradisiaca
Q0HVU9         11 HKAGLLNLAEELGn-----VSRACKVMGLSRDTFYRYQELVENGGVESLINqSRrtPNLKN-RVDDVTEN 74  Shewanella sp. MR-7
WP_008942593   11 HKVGLLNLAEELQn-----VSKACKVMGVSRDTFYRYQELASTGNMDALINqSRrtPNLKN-RVDEQTEQ 74  Acinetobacter sp. ATCC 2...
WP_013184439   11 HKAGLLNLAEKLSn-----VSRACKVMGVSRDTFYRYQELVETGGIDALINqSr-kTPNLKNRVDAETEH 74  Xenorhabdus nematophila
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