Conserved Protein Domain Family
HTH_28

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pfam13518: HTH_28 
Helix-turn-helix domain
This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.
Statistics
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PSSM-Id: 493460
Aligned: 62 rows
Threshold Bit Score: 30.2126
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5YMP9         26 RAEVIGRLA-QGDrvSVAAadeAAAELGV-TQRQV-YALVKRWRAgEGV--AsDLLPRR-S-SGG 83  Nocardia farcinica
Q812G8         64 KLDVLNFMA-QSGi-SLMD---TAAIFMVpSFTTV-YQWKKQFEV-GGL--D-ALEPKK-KgRPs 117 Bacillus cereus ATCC 14579
Q81CF0         64 KLDVLNFMIeNGM--SLFE---TAAIFNIpAPSTI-SVWKKQLET-QGI--D-ALQSKK-K-Grp 116 Bacillus cereus ATCC 14579
Q92VY1         64 KLSVLKRMWeDGL--SCRQ---TAALFNIrNAGCL-SDWERRYEI-GGI--D-ALAPRR-RgRPR 117 Sinorhizobium meliloti
CAL60541       64 RLRVLRQMWkKQW--SYQE---TGLAFGIrSQGCV-AVWERCYHN-GGI--D-ALQPRK-RgRPP 117
2_pfamImport    2 KLVVVRAVI-SDRl-TMRE---AAARFNL-SAEILvRRWLDVYND-AGA--E-GLLNIQcG-RPG 55 
Q74RD6         64 RLCVVRYMM-ANRc-SAAD---ASAHFNI-PNETIiQNWMKRYRE-GGK--E-ALNPSK-T-GPt 116 Yersinia pestis
WP_012108138  161 KLEVIAYA--KKH--SVKV---ATEFFGI-SNKNI-YRWIKEFEN-GGI--K-EIKDGR-G-KKS 210 Campylobacter hominis
Q24TC0        129 RVESVQYCIaHDH--NYVE---TSEKYQV-SYQQA-RNFTPKYEA-YGV--E-SLRDHR-G-KRK 180 Desulfitobacterium hafniense Y51
jgi:Lreu_1655  11 RLTIIEELI-KHDv-NYNW---AVEKYHI-SYQQV-YGWYQKYRK-SGNdpE-SLRDRR-G-KAK 64 
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