Conserved Protein Domain Family
FG-GAP_3

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pfam13517: FG-GAP_3 (This model is not part of the current CDD release)
FG-GAP-like repeat
This entry represents a repeat found in alpha integrins and related proteins in which form a 7-fold repeat that adopts a beta-propeller fold. This repeat contains a putative calcium-binding site. These repeats are found in multiple proteins from eukaryotes and bacteria and mediate diverse biological processes at both molecular and cellular levels, such as cell-cell interactions, host-pathogen recognition or innate immune responses.
Statistics
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PSSM-Id: 520772
Aligned: 578 rows
Threshold Bit Score: 26.4158
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Oter_2951  89 DYNNDGLMDVYFVngrwhpdvS-DNRgrslkgklaNALYRNNGd-GTFTDVTAAagvAGRV-DSYGMaASAADYDNDGHL 165
WP_012178672   48 DCDGDGLPELFAA--------G-GEA---------PAILLRNR--GGMRF-APG---LLPK-IIGVTgAYPLDIDGDGWR 102 Dinoroseobacte...
Q5LV43         47 DCDGDGLPELLAA--------GgENP---------ATLLRNRSdaGALRFEADTp--EALT-EPGMTgAYPLDIDSDGTM 106 Ruegeria pomeroyi
WP_013009671  222 HAKNDKNIYIAAA--------T-KKR---------IDLYEFTGt-G---FIPAG---SVDKeFDNIQnIELADLDGDSVD 276 Denitrovibrio ...
WP_012645935  192 RTLAKGARELYLL--------G-EHS---------LSLYHQDA---DLKMIAEA---TFDI-NDKPIgIDTADLDGDGTP 246 Geotalea daltonii
WP_011734465  204 KTLPDGSREVFLA--------E-DRR---------LSYYHQAEn-MSLRFAT-----EFGT-TDKIIgLDTIQ-GSDGKT 257 Pelobacter pro...
Q39QK5        208 KAAADGTRDFYVA--------D-EQA---------LRLYRKRe--G-LKLVAEV---SFSP-GDRVIaVDSADLDGDGTP 262 Geobacter meta...
Q747G0        203 KLMADGSQDFYLA--------G-DKS---------LRLYRKSd---NLKLLAEV---TFGA-REKVLgIDSADLDKDGIP 257 Geobacter sulf...
WP_011937596  190 RTLENGVRELYVV--------D-DHA---------LRLYRQG---KELELVAEV---TFGD-SEQILgVDTAALDGDGIS 244 Geotalea urani...
Q3A2I3        198 RKLASGEREVFVA--------G-DNV---------LRMYLLAd---ALTPLDEV---SIPL-PGTIVaLDTADLDHDNVP 252 Pelobacter car...
jgi:Oter_2951 166 DLYV 169
WP_012178672  103 DLFV 106 Dinoroseobacter shibae
Q5LV43        107 DLVV 110 Ruegeria pomeroyi
WP_013009671  277 ELFV 280 Denitrovibrio acetiphilus
WP_012645935  247 EAYV 250 Geotalea daltonii
WP_011734465  258 EVYL 261 Pelobacter propionicus
Q39QK5        263 EAYL 266 Geobacter metallireducens GS-15
Q747G0        258 EAYV 261 Geobacter sulfurreducens
WP_011937596  245 EAYL 248 Geotalea uraniireducens
Q3A2I3        253 ELYV 256 Pelobacter carbinolicus DSM 2380
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