Conserved Protein Domain Family
OMP_b-brl

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pfam13505: OMP_b-brl 
Outer membrane protein beta-barrel domain
This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.
Statistics
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PSSM-Id: 493448
Aligned: 49 rows
Threshold Bit Score: 60.1221
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015782163   10 VAFATITAVN--AQEFK---VGAKAGL-LLSd-L-SIANT-SIQWSDG-GTSYlttgdi--------nttlkaG--FHFG 69  Capnocytophaga...
WP_012083167    9 SGLLLGTTLF--AHEQDs-vHESEKPY-YVV--VkGIHNY-GDRNGNE-KGDH--------------------G--NGIG 58  Nitratiruptor ...
5_pfamImport    1 -LAAFTSIAS--AAPAT---SWEQGQW-QVD--L-GASDP-KAKFDGL-ESDT--------------------K--WNFN 46 
Q12NV4          7 TSTLLLSMGS--VQAAE---TAQAPRWdNVS--V-SYQSV-DVE------NKT--------------------L--TGFG 49  Shewanella den...
4_pfamImport    1 LSLLPLTVAC--ASPLA---KIAPGAA-KIDanV-TVGNTlKWKQDGK-TTDF--------------------GgdSRYR 52 
jgi:Amuc_1687  32 ALAASVSSAS--AYHAD---KYD-GQF-GMSleG-AYGIA--TKDAMP-NVA---------------------G--GNLS 77 
WP_012420697    7 ITSLGLMGLSctAQAAS---SDPWNYY-RMG--G-NYSSA-YST--RY-DSNFgmsirgmygfhsgndygidmP--DLYG 73  Akkermansia mu...
Q7VP29          6 AILTLVGLFS--VSAFAapvGQTFTGM-GIG--I-DLDTA-KYTSHGQnGKRK--------------------As-PMIV 57  [Haemophilus] ...
WP_010787112    5 ivVALLSSSA--LAAPV---GETFTGG-GIG--M-DVTTT-KYKNGDL-QGKQ--------------------A--IGIN 51  Glaesserella p...
WP_007749421    5 lifvlFALVS--IVSYS---Q---LSW-NAK--V-GMNMS-NFTGDAF-KDSKmr-----------------iG--FNVG 51  Bacteroides fi...
WP_015782163   70 GFIEYGF--ND---R---LFV-EGGIDYa--fQGA--KVKSGEtmtvnlstydvsnekeNPNGTS-IRTQQLNIP----- 130 Capnocytophaga...
WP_012083167   59 VDLGYRL--GH---G---FAI-EIDGSY----EKT--KVTVFEe--------------tETLREN-IKYWTTSLD----- 103 Nitratiruptor ...
5_pfamImport   47 GGLGYAL--SD---K---WAL-RYDYHGlkteAGD--FKTAG--------------------DEN-EVNLMYSLGrnaal 94 
Q12NV4         50 IAGSKLL--GE---S---FFI-TGGLSN----ASD--DIKTSN------------------GNVD-LDFNTKTLG----- 90  Shewanella den...
4_pfamImport   53 VGGTVGI--AD---N---LGL-DYRYAA----HEG--DH-------------------------D-ASAQSHQVS----- 86 
jgi:Amuc_1687  78 IFNYIET--GSivhQ---ISL-NSGILA----GSHhpS---VQdlg-----------isGPYTAS-LRSTYIPMM----- 127
WP_012420697   74 AQLGLHA--NI---PagsVFH-ELSFNLga-lTGS--KTYEG--------------------ELK-WKQQVFPFT----- 118 Akkermansia mu...
Q7VP29         58 LDYGMDY--GN---Nl--VGIvQAKAKL----NRT--KIAND--------------------LTQ-KNKYTVAYQ----- 98  [Haemophilus] ...
WP_010787112   52 FTLDYATdyGR---Nl--IGI-IDGKAK----LGS--SNIFH--------------------DIKqKSQYSIGYA----- 94  Glaesserella p...
WP_007749421   52 VGAEYQF--TE---M---WSI-QPSLMF----TQK--GTKMEEsee----------gitATAKLN-PMYLEIPVL----- 100 Bacteroides fi...
WP_015782163  131 -LWVKYDI--AGF-------R---PKVGVNLGfltK--AELKgknedg-------------------nsetlsLNPNKTF 176 Capnocytophaga...
WP_012083167  104 -VAYTYEM--SESl------G---ILFKVGYE---YeyEKTD-------------------------------SENGHDT 137 Nitratiruptor ...
5_pfamImport   95 fAGWAR-I--NNDf------DgsvARGTYGID---SsdSVVNnvaqfgaivka---------dlaknlalyaeGALGTKK 153
Q12NV4         91 -LGYRLPL--SHNt------D---VFGVVSYE---DmeAEVKyq---------------------------gnSVSGGDN 128 Shewanella den...
4_pfamImport   87 -LVY--QF--NPY-----------LYGYGGYV---RnrLKQHgyhdnnsgyqvgam----grlpitdkttgwaKFGTGNN 143
jgi:Amuc_1687 128 -AGYTLNLpiGDYtm----fY---LGGKVGAT---YgdVKTTihgled--------------------gsrsrTISSTKF 176
WP_012420697  119 -AGYSFNVplSDSat----fY---LGGKIGLH---YykQELSgg---------------------------ggKVSESDS 160 Akkermansia mu...
Q7VP29         99 -QGYRVG---SDl-------L---SYVKIDAS---Qtk-----------------------------------iGDTNYR 126 [Haemophilus] ...
WP_010787112   95 -QGYRLL---P-Di------L---PYVKLNYS---Is----Ki------------------------------SDFGSFK 123 Glaesserella p...
WP_007749421  101 -AAARFAI--ADNqnivvkaG---PYFAFGIAgkwK----TDiegdlggisvedvldyldipkeadlfgsgedQMDMKRF 170 Bacteroides fi...
WP_015782163  177 DFGLGV--GAEYNLPF-GLFFDATFNLglTDVstkektteqfpaLE------MRN-RVIQIGVGYKF 233 Capnocytophaga ochracea
WP_012083167  138 GLVYAA--GFEYAFDS-TWKILGEYEK--STI------------EG------PKG-DMITLGVMYNF 180 Nitratiruptor sp. SB155-2
5_pfamImport  154 TSMWEA--GLSYTIAK-DWDLNAGYRY--LDTkld-------ddNN------IKY-RGFLVGLTYRF 201
Q12NV4        129 GYGFEV--GVRSMVTE-HVELGASIQY--IDK------------SE------DSD-TVFAVSALYNF 171 Shewanella denitrificans OS217
4_pfamImport  144 ITQYEL--GVGYAFTD-NWEANVSYND--SKY------------KDfkgdidAKT-HEVNVGVSYKF 192
jgi:Amuc_1687 177 SWAAQA--GFKFSISN-SADFLIGYEY--YQIqg---------yND------PGY-HTIKLGFSWNF 222
WP_012420697  161 SGTYSAliGFKFAVAE-KTDIVIGYEI--TKYw-----------SD------VDPyHFITVGFSWSF 207 Akkermansia muciniphila
Q7VP29        127 GYGYGA--GVKYAVSS-NIEVGGEYTH--SHIkr--------ngNK------LKG-NELIAHVGYRF 173 [Haemophilus] ducreyi
WP_010787112  124 GIGYAI--GIKYAISN-DIEVGLEYSE--NNLkr--------ngTK------LKG-NAIGTNLSYRF 170 Glaesserella parasuis
WP_007749421  171 DFGIGV--GVAYEINKfFVSLDGEFGL--TKLvd--------gdGA------PKN-MNFSIGVGYKF 218 Bacteroides finegoldii
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