Conserved Protein Domain Family
PIN_3

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pfam13470: PIN_3 
PIN domain
Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).
Statistics
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PSSM-Id: 493417
Aligned: 38 rows
Threshold Bit Score: 37.6801
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5JGU5         7 RTVFDTSILVSALKsrSPSk--SPAWFCLTCL-----KEKFLENYVSSEIIEEMKFTLaiiaievASKtnRKGVLALADE 79  Thermococcus ko...
Q7NCD5         3 RVLLDLNVFVAYVLglSKGrtdTAAQFLVQCVrdgscALGPLQLVVSWGMLNRLEVVLmr---lgYDPvaSKGFAEAVAE 79  Gloeobacter vio...
WP_011807988   3 AVLFDTNVVLDVLLdrEPHv--HASAQAMALV-----ERGEVRGFLCATTVTTLFYLA--------SRalDARRARGQIE 67  Verminephrobact...
Q2S282         2 TICFDTNVILDGVLqrTPYq--QAATGLIHAV-----ERGDLTGQLCATTVTTVYYFV--------QKryDGPAARTDVR 66  Salinibacter ru...
WP_006197347   3 RVLFDSDVLLDILAerQPFi--IASAQALNTV-----ITKQVQGFVSGHGVTNIFYIL--------RRqiGSEAARKLIE 67  Cyanophyceae
Q7NI83         4 VVLYDTNVLLDIVLvrQPYy--RDSLLAVDAA-----SSERISGYIAGHAPTTLFYVL--------KKqvGAPQARRSIA 68  Gloeobacter vio...
WP_012808195   2 KLLIDANVLLDVFLcrEQFv--ADAKKLFIMK-----QFKDAELWIAAQSYTDLYYVG--------AKahGSDRMQKILK 66  Lancefieldella ...
WP_015956750   2 KYLIDADVILEYCLnrEQFv--KDTEYLWSLL-----ESQKIEGFITESGLNKIEFYF--------SQltSDEKAKNLIK 66  Gloeothece citr...
Q73PU8         2 KVLIDTNVILDVLLnrASFv--QDAIAVLEL------TCGNIQAYVSASAITDIYYIA-------YKElrDKIRVKNLIK 66  Treponema denti...
Q73K14         4 RVFIDTDIILDVALarEPFf--TASKIILAMA-----ENNIIIGNISSNCVANIYYIL--------RKsgGDNKARKFIL 68  Treponema denti...
Q5JGU5        80 LieliqRNSkkivPKVDFSRDQSVIRiiKDESDIKFLNVVYSAKAKFLLTQNTG 133 Thermococcus kodakarensis KOD1
Q7NCD5        80 LarlgpFQ-----EFPSVTLGGMGVValKDEEDAHVLGTAVAGRARILITANFK 128 Gloeobacter violaceus
WP_011807988  68 AllrlfDVA----PVTRLVLTDALGIgfADYEDAVLHEAARHAGVLCIVTRNVR 117 Verminephrobacter eiseniae
Q2S282        67 DllhlfDVA----PVHRAPLERAAESdfQDYEDAVLHSAARTAGADGIVTRNTA 116 Salinibacter ruber DSM 13855
WP_006197347  68 TllqhiQIA----SVTDEVIHQALHSpiKDFEDAVTSAAAMAASLEIIVTRNTS 117 Cyanophyceae
Q7NI83        69 HllahlTVA----AVDDAGIRGALVSpfEDFKDAVTAMAAVGVNAQFVCTRDLK 118 Gloeobacter violaceus
WP_012808195  67 EvfpllNVC----SIDGADISYALDEqwKDFEDCLIWRAAKKIKADYIVTRNVA 116 Lancefieldella parvula
WP_015956750  67 DlkklvKIC----PVDRYILDAARKSnlKDFEAAVEIECAIKFNCDAIIVWNYL 116 Gloeothece citriformis
Q73PU8        67 TllqiiTVA----GISDKEIMSAIDSdwADFEDSLQNAVAESHDCSMIITRNIS 116 Treponema denticola
Q73K14        69 NivkyiTVI----VINHRNVLDSLRSkfSDFEDALQHSSAVENQCEYIITRNIE 118 Treponema denticola
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