3KK4


Conserved Protein Domain Family
RHH_4

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pfam13467: RHH_4 (This model is not part of the current CDD release)
Ribbon-helix-helix domain
This short bacterial protein contains a ribbon-helix-helix domain that is likely to be DNA-binding.
Statistics
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PSSM-Id: 520748
Aligned: 97 rows
Threshold Bit Score: 71.0084
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KK4_A         19 QARSLRLHGVATSVRLEQLFWDVLEEIAARDGXRVTQLIERL-YDElvqyrgEAANFTSFLRVCCLRY 85  Bordetella pertussis Tohama I
WP_012171092    6 VKRSIVIAGHKTSVSLEDAFWDALKEIAGQRRLTLSDLVATIdSGR------NQGNLSSAIRLFVLDY 67  Azorhizobium
WP_012562433    6 VKRSIVVAGHKTSVSLEEAFWNGMKEISSARGMTLSELVGEIdSQR------KQGNLSSAIRLFVLDH 67  Afipia carboxidovorans
Q1QJT3         18 VKRSVIVGGHKTSVSLEDAFWTSLKDIAMRRGMTLSTQIASIdTDR------RTSNLSSAIRLYVLEH 79  Nitrobacter hamburgensis X14
MSU:OCAR_5271  36 IKRSVVVDGHKTSVSLEDAFWASLKDIAARRGLSLSMQIATIdQNR------QTNNLSSAIRLFVLDY 97 
Q2W7L3          6 VKRSVKIAGHATSVTLEAEFWDCLRELAESRGTSINQMVAGIdSTR-------EANLSSAIRVFVLNE 66  Magnetospirillum magneticu...
12_pfamImport   2 KKHSIIIAGHASSITMEPAFWDELKKISERDGVSINQLVSVIdTDR-------DGNLSSAIRLFVLND 62 
WP_012567043    3 KKRSVLVAGHPTSVTLEEPFWEALKELAAARGVPVGTLIEEVdATR-------TGNLSSALRVHVLEA 63  Rhodospirillum centenum
Q2RS87         11 RKRSVTIAGHRTSVSLEEPFWDALKDLAKARGQSVNDMVTEIdAGR-------SGNLSSAIRIKVLEA 71  Rhodospirillum rubrum ATCC...
WP_015927430    9 RKRSVMIAGHRTSVSLEGPFWEALQQLAAARGLSVQALIGRIdAGR------AEQNLSSAIRVFVLRE 70  Methylobacterium nodulans
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