Conserved Protein Domain Family
HTH_27

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pfam13463: HTH_27 
Winged helix DNA-binding domain
Statistics
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PSSM-Id: 493410
Aligned: 17 rows
Threshold Bit Score: 51.1704
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Hbal_2474  84 LTRQQACI-LWTIRaegengvRMRRKDIEAALCKWYDVTSSAIS-KSLRAMTRPpfDLL--QMTEDPMNGREKFVSLTPK 159
WP_015515056   31 VKRVEIEI-LRFLA-------MSGERNTAADIHRYLDLNKGQIS-KTLEHLCTM--HYL--ESMPDKKDRRYMHYILSEE 97  Coprococcus catus
WP_013424557   29 LSGPTRAI-VFDVF--------ENPGSSISEITARVEFPQSQVS-ACVARLREA--EVF--ETVSDPADRRRTLVRPTAS 94  Pseudofrankia ...
1_pfamImport    1 ---NEAMA-LCCIG---------GDTLTASVISENTGLSASHTS-KVIRSIEEK--ELI--VRNLGDKDKRQMHFTLSDK 62 
4_pfamImport    1 -NAVQALL-LYNIG---------ENEVVIRDLKDRGYYQGSNVS-YNIKALTEY--GYL--TQERSAHDRRSVRLKLTDK 64 
WP_011586005   79 FKTLEDFVyLNNLK--------ELGIVTKKQLIDKHVTEYTTGI-EIIKRLINL--GLV--KEKHYPDDKRSTAIEITAK 145 Cytophaga hutc...
Q4JSS6         36 LTNSQAEA-IEIIG--------TYGPMSTREVGDYLICESGSPS-RLLATLAEK--RLT--MTSQSAEDKRITLHALTPA 101 Corynebacteriu...
Q16DH9         53 LGALDVLV-LHSVY-------HRERPKKLADICLVLNVEDTHTVnYAIKKLIKA--GLVkdGRQGKE-----KTVVATKK 117 Roseobacter de...
3_pfamImport    1 LSPLDALI-LHSVN-------HRHRQKSISDLMFTLNLSERHYLnYAMKKLDRL--GLItrRRDGKE-----VFVGATEK 65 
Q0A5S7         71 LNYSELII-LHVIN-------MQSHPQPSALIARQLNRDDLPNIqYSLRKLIKQ--GLV--EKVKD-TGGKTYCFDATDK 137 Alkalilimnicol...
jgi:Hbal_2474 160 G 160
WP_015515056   98 A 98  Coprococcus catus
WP_013424557   95 A 95  Pseudofrankia inefficax
1_pfamImport   63 G 63 
4_pfamImport   65 G 65 
WP_011586005  146 G 146 Cytophaga hutchinsonii
Q4JSS6        102 G 102 Corynebacterium jeikeium K411
Q16DH9        118 G 118 Roseobacter denitrificans OCh 114
3_pfamImport   66 G 66 
Q0A5S7        138 G 138 Alkalilimnicola ehrlichii MLHE-1
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