Conserved Protein Domain Family
HTH_26

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pfam13443: HTH_26 (493392 is an unknown moldel)
Cro/C1-type HTH DNA-binding domain
This is a helix-turn-helix domain that probably binds to DNA.
Statistics
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PSSM-Id: 493392
Aligned: 64 rows
Threshold Bit Score: 36.3865
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012014123  12 RLREMMAARGVfTATELvpllhERGIDLSASQVHRLVTGTPERLSLPVLAALCDILEVT-PTDLVVTT--AA 80  Salinispora
Q97IT0        10 ELKRYMQDNFI-NPNIL-----ASKAGINKHVFTEILNNTSRKVYGDEVAGICNATGLT-LKEILKLN--KK 72  Clostridium acetobutylicum
WP_012065037   6 MIKQLCEQMNI-SVAEL-----ARRIGQTPQNFNKKLKRE--TVTLNELKTIADVLDIK-FEQAFILP--DG 66  Alkaliphilus metallired...
CDA10604       6 mIKELCNKKNI-SVSEL-----ARRIGQTPQNFGKKLKRD--TVTLEELKLIADVMGVT-FEQSFIFpdger 68 
Q8ELI4        14 KLDSILIDRNM-TQFQL-----HKLTGIRMATISEFINGKKGSVNFVHLVTIMAALRITdISEIISVK--FD 77  Oceanobacillus iheyensis
WP_015948020   9 RITKIMADREI-TVQDM-----SQRTGLDQDFLETITKEDL-YPSLGPLLKIARALGVR-LGTLIDDQvsQD 72  Desulfatibacillum aliph...
WP_015905969   9 RIRYFMDKREM-DLAAL-----AGLTGLKQEFLDTMLNENV-YPPLGPLMKIARALGVR-LGTFLDDQ--ES 70  Desulforapulum autotrop...
WP_003667079   4 NIINILKTNNM-TVTFV-----AQESGLDVAQVNETLKRPVATWSIQILNALADALGER-PGELLDRI--QD 66  Limosilactobacillus reu...
Q8YPP8         7 ELQNLMQQASIsSFKAL-----SRQAGVSEYQVLRLRQGKLEQMRLDTLLKLSKALQVP-LSELLSTF--LE 70  Nostoc sp. PCC 7120
WP_003668037  10 NLRVRMATLSF-KTSDL-----YKMTGISKTTIMALEYGKNKGVMFETIDKLAVALECK-PEDFFKLN--CE 72  Limosilactobacillus reu...
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