Conserved Protein Domain Family
Peptidase_M50B

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pfam13398: Peptidase_M50B (This model is not part of the current CDD release)
Peptidase M50B-like
This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.
Statistics
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PSSM-Id: 493351
Aligned: 57 rows
Threshold Bit Score: 88.392
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5HR99        23 G-LLYVIIHyyrnkgvnaFLDIY-----LNYIPVLTHEFGHVLFNKLAGGKAKDLVIVTSprerkvtsQQGYAITQSkgY 96  Staphylococcus ...
XP_002185273  26 A-FFVLYHT---------TILKP-----MRLLSVFVHEFGHASACFMTGGSVKKIEVYEN--------EGGVTGYTG--G 80 
XP_002287158  52 A-NFFLWNT---------ALLKP-----MKLIAVFVHEMSHATACWMTGGKVTAIEVYNN--------EGGVTKYQG--G 106
3_pfamImport   6 A-AVILWHC---------EVWGYsvllpLKMLTVFFHEFGHATATWLTCGRVHGIEVHTN--------EGGVTKTTG--G 65 
Q8IDK2        27 I-INIICWKw--------KILEP-----FKLLTVFLHEFSHASACWLTGGKVKAIEVNKD--------HGGSTRTVG--G 82  Plasmodium falc...
2_pfamImport   7 V-NIICWKC---------KILEP-----FKLLTVFLHEFSHASACWITGGKVKGIEVNRD--------HGGCTNTVG--G 61 
1_pfamImport   7 I-NAMFWKC---------KILEP-----FKLLTVFLHEFSHASACWLTGGRVKSIEVNRN--------HGGCTNTIG--G 61 
XP_002322063  28 V-ILALWRT---------VLLRP-----FKLVTVFLHEASHAIACKLTCGHVEGIQVHAD--------EGGTTQTRG--G 82 
XP_024362209  26 FiILALWRT---------PVLLP-----FKLITVFLHEASHATACKLTCGKVEGMEVNVN--------EGGVTHTRG--G 81 
XP_002906522  27 A-IFKLWRV---------SILHP-----FKILTVFLHELGHATAAWLTCGSVKGMEVHPD--------EGGVTKTIG--G 81 
Q5HR99        97 LGQFITTIGGYLMPPLMFLTGLVSI-HY-QYP-SI---FIT---IYLFIFIYYFFITsRKLSPL---IVIIL---ISSLL 161 Staphylococcus ...
XP_002185273  81 CR-TLVIPAGYVGGAFWGGVFVALS-GS-KIGsTI---VAS---LISFALLISLCLK-PNTMVV---ALSLGfssLLIGF 147
XP_002287158 107 K-RCFIIPAGYLGCAFWGSVFVVLS-GD-RTA-AL---ISAc--VFLLALVVSLFFA-PNKVMV---MLSIG---FIVLT 170
3_pfamImport  66 -SQCVILPAGYLGSCVWGMFFLLMA-SL-NIW-TL---RVGagiLCFAMLVVLVFFA-RNCTLR---LVCLF---FLALV 131
Q8IDK2        83 -NQYLILPAGYIGSCFYGMFFILMA-YL-SKW-TL---LIStvfLCFLLLLVLVVYA-KNMFLR---FLCLL---FLSIT 148 Plasmodium falc...
2_pfamImport  62 -NMFLILPAGYIGSCFYGMFFILMA-YI-NKW-TLlssAVF---LSFLLLIVLTFYA-KNFFLR---FLCIL---FLGII 127
1_pfamImport  62 -NQFLILPAGYIGSCFYGTFFILMA-YI-NKW-TLitsAAF---LCFLLLIVLIFYA-NNFFLR---LLCVL---FLALT 127
XP_002322063  83 IYW-LILPAGYLGSSFWGMVLILAS-TNlLTA-RI---AAG---CFIASLLVMLLVA-KNWTLR---GLCIG---FVLFL 146
XP_024362209  82 KQ-WFILPAGYLGSSFWGMVLVVAStNY-LTL-RI---AAG---LLCAALVVVLVIA-KNWFLR---FLCLG---FLAFL 145
XP_002906522  82 LQWV-ILPAGYLGSAVWGMALTIAS-AD-KTAsEV---AAG---VLIFFLLIFIFYA-HNGYLRilnFCFIL---LLAGL 148
Q5HR99       162 YLVFKQ---DHQ---WFIYdi-vTLSYHFILGVLL-GEILQsswtI-------FRLtFQRPKPSWDGSALTKVTR----- 221 Staphylococcus ...
XP_002185273 148 IFIEWF---VFD---PLLE----FITLFFGVFIGM-YSVRD----Iy------DDL-ITRTAEGSDAVACNKLYPcclpr 205
XP_002287158 171 GGFILLdrfVFN---PLLQ----YLTLYYGVFIGS-FSVYD----Iy------DDL-ITRTVEGSDAHACHQLIP----- 226
3_pfamImport 132 VGLWVW---TEM---EKLVwplrVILLGIGVMNGV-YSLWD----Iw------DDT-IRRKVRESDAYKCADLTH----- 188
Q8IDK2       149 ISIWVL---CEY---YKDK----VYYWPLIIIMTF-IGVLNemysIvd---ifEDL-ITRSTPDSDSYKYAKLTK----- 208 Plasmodium falc...
2_pfamImport 128 IGAWGI---G-V---SFNE----SKYWPLKVIMTF-MGVLNe---MysmvdifDDL-ITRTTPESDAYKYAKLTK----- 186
1_pfamImport 128 ISIWVL---CVH---FQED----VQYWPLKIIMTFiGVLNQ----IysmvdiiEDL-ITRTVPESDAYKYAEMTK----- 187
XP_002322063 147 GVVWVL---QETtkiHILR----YIILFIGVMNSL-FSVYD----Iy------DDL-ISRRVHSSDAEKFAEVCP----- 202
XP_024362209 146 ILIWVL---QEL---TIIKil-rYVILFMGVMNGL-FSIYD----Iy------DDL-ISRRVNSSDAEKFAQLCP----- 201
XP_002906522 149 LALNIW---TTF---DALQ----YVTLFLGVMSCL-FSVYD----Iw------DDL-ISRRVNESDASVFAKMTH----- 201
Q5HR99       222 -VP--TFIFSLV-WILFNLYTVYL 241 Staphylococcus epidermidis RP62A
XP_002185273 206 cVG--VQFWMVA-FAFQVAGIYCA 226
XP_002287158 227 -CC--IPRCVGLqFAIVALGFQAL 247
3_pfamImport 189 -CS--SRLCGVI-WAAVAVAFMAA 208
Q8IDK2       209 -CS--SKLCGVL-WLLINFFFIIL 228 Plasmodium falciparum 3D7
2_pfamImport 187 -CN--SKFCGVL-WCVINLGFIIL 206
1_pfamImport 188 -CN--SKFCGAL-WFVVNLVFIFS 207
XP_002322063 203 -CPcnGAGWGFI-WGVISFLFLCG 224
XP_024362209 202 -CPcnGVAWGVI-WGFFSLIFLLA 223
XP_002906522 202 -TS--SRCWGVI-WGLIALVSLVA 221
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