Conserved Protein Domain Family
SBP_bac_6

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pfam13343: SBP_bac_6 
Bacterial extracellular solute-binding protein
This family includes bacterial extracellular solute-binding proteins.
Statistics
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PSSM-Id: 493305
Aligned: 42 rows
Threshold Bit Score: 101.271
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q3A7B6           85 DDKADLIsppielpKIPRFFSFQEGKQYLQPVD-------VNNIPNLAkmmevfrNDQTPFyNGVRYgvPYNCGPYGLAF 157 Pelobacter c...
WP_013484508    108 NPTKDIGd------VGQSFGPLAVQKDLVQAYK-------TPYWNDIP-------SWAKDK-DGKWI--VGYYGTISFMT 164 Ethanoligene...
Q6N9R2           74 NPVADIGy------FGVNFGMKAKAQGVTQPYK-------PAKWDEVP-------AGLKDP-DGEWT--AIHSGTLGLFV 130 Rhodopseudom...
WP_012030536     81 SPKISVVi------MDDPVMLPAAAEGLITKMS-------ASSIPNLGkl----vDGSVHQ-DGMWA--NYQKPWVGIAY 140 Bradyrhizobi...
CAM11467         42 DDKYDLAi------LSEYAIDKLIQDELIEGINsekleksNNYNWQYNdqykefkEKLPK--RFSNYavPYFWGKVVLIY 113
wugsc:CKO_02091  84 AENVDLIl-----tSSPMLLQHLQEHQKLAPFN---------GAPSVSq------HLVPESiRSTSV--AVAISGFGLLI 141
Q5WCW5           91 NPVADVVv-----lASVPSMEGLKSEGMLQPYE-------AKNGELMN-------QEWSDS-DHYYY--GYSASALGVAY 148 Bacillus cla...
WP_010079201    102 GSPADVFl-----sQDAGALGAVAKEGLFTPLA-------QETLDRVP-------ETYRDD-EGDWV--GLTGRVRVLAY 159 Micrococcus ...
tigr:NT01CX1292  79 FQKADIFl-----gGTADAIELLKNNNCLDKYV-------IENTKKIS-------EQYRDN-DGYWT--GLYIEPLSIGI 136
2_pfamImport      1 NPKADIIi-----gGTVDAHQMMKQKNLSIPVT-------SQHANRIS-------KTVKDK-DGYWY--GYEVEKLAIAI 58 
Q3A7B6          158 NRDKVaaA--------P--TSWNVLWDPQYAGQYTINNNFPkvNVWISALALGYGYedifdiNNLdRAKVQEKLNALAKN 227 Pelobacter c...
WP_013484508    165 NTDSV--Kn------pP--KSWSDILNGNYKVCVGDVTKAN--QSQNAVLAAAIAMg----gSEKnIQPGIDFFAKLAAQ 228 Ethanoligene...
Q6N9R2          131 NVDALggKp------vP--ACWRDLEKPDYKGMVGYLDPPSaaVGYVGAVAVNLALgg---sDQD-FSPAVLFFKKLHDN 198 Rhodopseudom...
WP_012030536    141 STKRMktA--------P--TSWAELWDAKYESKIVIPSLSNteGFWNLLAAAHLETgkpfkeAQYeIDAAFKKMKSLKAN 210 Bradyrhizobi...
CAM11467        114 NKQKInkEei-------tkESFKILDKPNL--KIALCNNP----RDGLMVGLKATGgtiekpTEKeLENAKKWLLKLKEK 180
wugsc:CKO_02091 142 NRSALtaRh------lPspTGWDDLTDPRYQGALLMSSPSR--SDTNHLMVEALLQ------QKG-WAQGWETLLASAGN 206
Q5WCW5          149 NTNQVdnP--------P--GEWTDFSDPEWANRVTMPDPTSs-GSAVDFLYGLTST----------EADGWEWIEGWIDN 207 Bacillus cla...
WP_010079201    160 NEEKVpeAd------lP--TSVDELTDPKWKGRVGVAPTN----ASFQTFVTALRL------QKG-EDEARTWLEDFAAN 220 Micrococcus ...
tigr:NT01CX1292 137 NEERWnkEfkd--lkkP--TKLEDLLNPRFKGEIVLPDPRT--SGTGYTFLSYIVQ------SMG-KDKGLEFFKKLKNN 203
2_pfamImport     59 NKERWneEiaplglpyP--SRWQDLLNPVYKEKVVMPDPNV--SGTAYTFFQSLID------TVG-EEEAKEYVKSFAGQ 127
Q3A7B6          228 AKSLW---DGAANPEEFPE---LALATTWGFAAQAANLkg------gNWRLATPAE-GGTAWIDCWYIGSGakgmTKTLA 294 Pelobacter c...
WP_013484508    229 GRLDMg--DSSMTRLEKGD---VQVVILWDYLSLGYRDkvkqsgstvNYDVTVPTD-GSVEGGYAEVINKYa--pHPAAA 300 Ethanoligene...
Q6N9R2          199 DAIVPk--QTSYARVVSGE---IPILFDYDFNAYRAKYte-----kgNFAFVIPCE-GSVVFPYVVSLTKGa--pNADKA 265 Rhodopseudom...
WP_012030536    211 LLNVYtnaPQAINLLEQGEa--WMIGGQFSAYTLIRKAdg------sPVDLAIPKD-GGFSMPSGIAKVNGa--pAGDLA 279 Bradyrhizobi...
CAM11467        181 NPNVAfinDQLIDRMSQKGkeyYDVVVAYSGDANFLKEkn------dNLEVLDPKE-GTNVWVDSLVMPKNs---CKELA 250
wugsc:CKO_02091 207 LVTISsrsFGVADKIKSGLg-vAGPVIDNYANLLLNDP---------HLAFTYFPQ--SAVSPTYVAVLKNs--qHASEA 272
Q5WCW5          208 GLLVAganKESLDAVITGDkdvVVSAVDYMAYKAKASGe--------PIEIYYPES-GTVISPRAAGVLGDa--tNVSGA 276 Bacillus cla...
WP_010079201    221 DPQRReknGEILADVDAGTl-dTGLVNHYYLFELAREKgvapeelgaSLHFFPDGDlGSLVNVSGMGLVGEq---EDGDA 296 Micrococcus ...
tigr:NT01CX1292 204 VGQFTdsgFTPAKKVGLGE---YLLTVDFINQQLIVKNsg------fKIESIVPKDaGWTICPVAKIRNSQ----NEKVA 270
2_pfamImport    128 VGEVTvngYMPVELVASGE---YMIGINFMGDQRMLQKqg------fPVVSIVPEQtGLSVNAISKLKRAP----NGIIA 194
Q3A7B6          295 EEWINFMLEPA-RQADVVKSQGv-------SPVm---------ADTGNTLNAEEKAMFHVGDDAYFKTV 346 Pelobacter carbinolicus...
WP_013484508    301 ALARDYILSDQ-GQINLAKGYArpirsdvkLPAd---------VKAKLLPDSEYKKARPVKDFDAWDKT 359 Ethanoligenens harbinense
Q6N9R2          266 KKVMDYLLSDK-GQAIWTNAYL--------RPArpia---lppEVKAKFLPDSDYARAKNVDWAKMEaa 322 Rhodopseudomonas palustris
WP_012030536    280 DAVIDFYLSPE-AQSILAKTAFi-------APTn---------QATPLPDGYPDPATLFAPDWAFIAKN 331 Bradyrhizobium sp. ORS 278
CAM11467        251 YKFINFLREKNnYQKNLAYIKYd-------SPYk------------dKNNKIKINENDQIYKYDEANQK 300
wugsc:CKO_02091 273 RRFIRYLLSPE-GQRILADANTg------kYPVtplaagnpraAQQAVLMNQPPLNYRLILKRQRLVQR 334
Q5WCW5          277 QAYIDFLLSDK-AQQLVADAYL--------LPGn--------eEIALSDRAALSEIPVLPVTWEGAEEK 328 Bacillus clausii KSM-K16
WP_010079201    297 AALVEYLLSED-GQSYFAEETGe-------YPLve-------gVEQPAGFPELSEVKAPDVDLNDLDDL 350 Micrococcus luteus
tigr:NT01CX1292 271 NAFIEYCTSKE-AMEALREFSMa-------IPTt---------NDNADNKNTELYKLSSTYNFNKAAKD 322
2_pfamImport    195 DLFIDYCLSEE-AGHILEKVSFg-------VP-----------TMFAKNEKEIEGQPVRRTNQNISN-- 242
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