6KAC


Conserved Protein Domain Family
PSII_Pbs27

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pfam13326: PSII_Pbs27 (This model is not part of the current CDD release)
Photosystem II Pbs27
This family of proteins contains Pbs27, a highly conserved component of photosystem II. Pbs27 is comprised of four helices arranged in a right handed up-down-up-down fold, with a less ordered region located at the N-terminus.
Statistics
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PSSM-Id: 520667
Aligned: 18 rows
Threshold Bit Score: 100.156
Created: 16-Feb-2025
Updated: 25-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6KAC_U        41 RRELLGLSAVAASLLLSS------------------------RPAHAIFGFaddn------------------------- 71  Chlamydomonas r...
XP_006357500  38 RREFLSLSAGILSPSLLL------------------------PATSAFAAT----------------------------- 64 
XP_001700736  41 RRELLGLSAVAASLLLSS------------------------RPAHAIFGFaddn------------------------- 71 
XP_002282406  45 SRRHVLVGSGASLVAILTfnggflplpvwaedesngqeddekGVVGAIKSLfdpneki---------------------- 102
XP_006583054  46 SRRHLLISVGPSLV---TltcglspsmvwaeeksgekeeedkGVIGAIKSLfdpnekt---------------------- 100
Q00XW4        33 SRRFVAL-SLALAAASTA------------------------SAPGANAQKfkevcdptedgaecranilaqdgidvgay 87  Ostreococcus tauri
XP_003059349  69 vaastsammttrVSPARA------------------------SSADMLAGVrtkvcdptadgaecraneigkdlg-glgd 123
XP_002503767  46 QRRAVLLAGLASTTALFF------------------------DAQRANAARptpvcdptadgaecranllqgdes-nldg 100
Q46GR8         7 RLSIRLVRAALAICLGFC------------------------LMLFQFASEvnaa------------------------- 37  Prochlorococcus...
XP_002288234  27 RRQFLQTASNAAASTILA------------------------FPTLAFAEIevpaqstey-------------------- 62 
6KAC_U        72 ----------------talFDTYTAETSAILDKVKVTLALDK-DDPAKEDSVKGLRKDINNWVAKY---RREPKVSGKPS 131 Chlamydomonas r...
XP_006357500  65 -------------------DEEYVKEASEVIQKVRSTLNMDK-GDPNIADSVAELREASNYWVAKY---RREKALLGRAS 121
XP_001700736  72 ----------------talFDTYTAETSAILDKVKVTLALDK-DDPAKEDSVKGLRKDINNWVAKY---RREPKVSGKPS 131
XP_002282406 103 -------------ksgkvlPKAYLNSAREVVKTLRESLKEDPkDIAKFRRTADAAKESIREYLSSW---RGKQTVVSEES 166
XP_006583054 101 -------------ksgkvlPKAYLKSAREVVKTMRESLNEVTdDNAKFRRTADSAKESIREYLGSW---RGNQTVAQEES 164
Q00XW4        88 evggsrsfkaanptgaktsLTTYQSDTLEFVGEVEALLAMDV-YDGSREKAVAAFQKKSNNWSGKYapgGSSKMASGRAF 166 Ostreococcus tauri
XP_003059349 124 ydqkankkvelakamtnpnMTNYQLDTMKLVDECAEVLALDV-YDLTREKRIGQLVKDGNVWSSKYapgGSSKTASGRAF 202
XP_002503767 101 yeaksarkielaktstnpdLTNYQKETLALVGEMEEVLGLDI-YDMTREKRISQLKKDSNVWAGKYapgGSAKTASGRAF 179
Q46GR8        38 ---------------ktlmTGDFAKDTIAVSSTLKETITLPK-EDKGLSEAEKEAVFLISDYISRY---RNRSQVNTSTT 98  Prochlorococcus...
XP_002288234  63 -----------tfpsdwglTYNYEADAARVRSHMVTATGLAK-GSERMEDFGKNLKKEMIDFVSYY---RRFPQVAGKPS 127
6KAC_U       132 FgntySALNALAGHFNSFGaTAPIPKKRLERLQKELDDATLLL 174 Chlamydomonas reinhardtii
XP_006357500 122 FrdiySALNAVSGHYVSFGpTTPIPAKRKVRILEEMDTAEKAL 164
XP_001700736 132 FgntySALNALAGHFNSFGaTAPIPKKRLERLQKELDDATLLL 174
XP_002282406 167 YamleKAIRSLASFYSKAGpSAALPEEVKSEILDDLNTAEEFL 209
XP_006583054 165 YvileKVIRSLANFYSKAGpSAPLSQEVKSEILDYLNTAEEFL 207
Q00XW4       167 Y----NALNQLAGHYSFNG-LAPIPKSRLDVVETNIAKTKELI 204 Ostreococcus tauri
XP_003059349 203 Y----NAINQVSGHFNFNG-IAPLPKSRLDVVNANLEDTRKLI 240
XP_002503767 180 Y----NAVNQVSGHFNANG-IAPLPASRLEVVTANMVKTRELI 217
Q46GR8        99 FttmqTALNALSGHYKTFA-NRPVPENLKERLNKELSKAEK-L 139 Prochlorococcus marinus str. NATL2A
XP_002288234 128 FstlyTSINVLAGHYTSYGyKYPLPEKRRKRLYQEYAEIDKSL 170
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