Conserved Protein Domain Family
DUF4082

?
pfam13313: DUF4082 (This model is not part of the current CDD release)
Domain of unknown function (DUF4082)
This domain is distantly related to the PHR domain pfam08005. This domain is often found between successive bacterial Ig domains, pfam13205.
Statistics
?
PSSM-Id: 520662
Aligned: 43 rows
Threshold Bit Score: 76.5355
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_054050761   10 ATGPGS-SVAD---SPVNLGVEFKVTSTAWLKGIRFWRAd--TDQDGSIQCRCYqvvtSSTGSAVSGSdgSFTLT--GTG 81   Alloactinosyn...
WP_081847175  665 AAITPN--ALNe-gVSLELGMRFAPTQSGIITELHYFRTltdSDDTDIRDGHLW----DASGNLLATV--NFTSApgESG 735  Thioclava indica
WP_015100543  144 ALDPd--------wEPVELGLKFQVDRPGTLTGVTIDRG----PYTGPIETRVW----TGSGELLAD---TLSGAp-GIG 203  Saccharothrix...
WP_008293314   25 LTTPGA----EfgsSSYTLGFEFAVSSAISVTSLGVYDSg-aDGLEESAQVGLW----SNAGDLLTST--LVPAG--TAG 91   Congregibacte...
8_pfamImport    1 DSTPLN-AVVDkdtKPVELGLKFRSDVDGEVSAIRFYRA---VANESGYFVHLW----SSTGELLGTGm-AFEGQqpAPG 71  
WP_014396256  283 TPAPSGvFASDd-tAGVEVGVRFKSEVPGIVDAVRFYRDp--GAPLEKRVVHLW----DAQGVLLATG--VFVGEg-GPG 352  Corallococcus...
WP_056152203   59 DVVPDV-PADPe-rGEVTVGVEFSSTVPGTVTGVQFYRS---TENRGPHTGQLW----SPSGDLLGSV--RFTDGv-RGG 126  unclassified ...
WP_010834039   56 SVEPPV-PAVDd-pSSVTLGVEFASDTGGVVNAIQYYGT---AANSGQHLGQLW----GPRGGLLASV--KFTHTt-TRG 123  Nocardioides ...
WP_056222686   17 DLQPTI-SGDSd-rDAVELGIRFSPEKSGEVVALQYYQG---AEATGITQATLW----TSRGETLARV--SFAATt-AVG 84   Microbacteriu...
BAK37882       52 AVVPEV-SAVGh-sTSAEVGVRIYPTTDGTVNAVQFYRGa--KQRDRAFSGSVW----SASGTRLARV--TFAATs-ETG 120 
WP_054050761   82 -----WQDVIYGTPIALTVEQRYKAICHFp-SG-LCFTANYFnaggpaENGITNGPLHVfgtstaTGGFQGSYNYNSg-L 153  Alloactinosyn...
WP_081847175  736 -----WQTATLSAPVTVIAGTTYTASYHT--EDaYAATAGFFt----qDFSDPYDQLTA------PNGLNGVYAYSVt-P 797  Thioclava indica
WP_015100543  204 -----REWVSFEPPVPVQPGQDYVVSYFSrwSSrYQASQDYF------TGTILQAPFIV-------KPGAGVFHYEVh-G 264  Saccharothrix...
WP_008293314   92 eldglFRFESI-SPYLLSAGQTYVVGAYLggAGiASSCDTG------------QGGACAid--pqVSVFNDRYSPFDstF 156  Congregibacte...
8_pfamImport   72 -----WQTVQFYPPIPVKAKQIYIASYYVn-SGrYVASEKFFe-----NAGVDNGFLHAlr--ngEAGSNSTYIYGYg-G 137 
WP_014396256  353 s---gWQTVDLYPDVAVQENTAYTVSYYAp-AGgYTVTSQAF------VISHYVQPLHV-------EADGGVFAYGPe-G 414  Corallococcus...
WP_056152203  127 -----WTTAAFEHPVSIDPAKRYVVSYTAp-DGrYADDEYDLr----pTRPVTTQDLTA---------WRGVYTYG---D 184  unclassified ...
WP_010834039  124 -----WRTARFTKPVKIRPGVRYIASYRAp-NGrHAIDRDSLg----gGRTVSTKDLTA---------FRGTYLAG---T 181  Nocardioides ...
WP_056222686   85 -----WRTIPLAQPVSLTAGKTYVASYNAp-RGgYPLTEQAL------KKTQHVNGFTL-------RAGAGVYRYGPt-S 144  Microbacteriu...
BAK37882      121 -----WQVATLASPVSVKAGEPFSVSYFAe-GGrYPVSRTF-------TREYGQSGLTV-------PVNGGIRRFTNt-S 179 
WP_054050761  154 AYTDNgvaT-----NYWV 166  Alloactinosynnema sp. L-07
WP_081847175  798 VVPEG---Sye-atNYWV 811  Thioclava indica
WP_015100543  265 GFPTD---Twr-nsNYWI 278  Saccharothrix espanaensis
WP_008293314  157 GFPTQ---Tdn-tgGVWL 170  Congregibacter litoralis
8_pfamImport  138 GFPTQ---Syn-stNYWI 151 
WP_014396256  415 TFPTL---Swe-ssNYWV 428  Corallococcus coralloides
WP_056152203  185 DVPQQ---Swh-wsNYYV 198  unclassified Nocardioides
WP_010834039  182 GRPTR---Tvn-esNYFV 195  Nocardioides sp. CF8
WP_056222686  145 KLPTR---Sya-gsNYFV 158  Microbacterium sp. Root61
BAK37882      180 QWPSS---GvnhgmNFLV 194 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap