Conserved Protein Domain Family
SDE2_2C

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pfam13297: SDE2_2C (This model is not part of the current CDD release)
Replication stress response SDE2 C-terminal
This domain represents the C-terminal region of the Replication stress response SDE2, a genome surveillance factor. It contains the DNA-binding SAP domain, frequently found in proteins involved in DNA repair. SDE2 C-terminal domain must be cleaved from its N-terminal at a diglycine motif within the ubiquitin-like fold, after Proliferating cell nuclear antigen (PCNA) interaction. This generates a functional protein that negatively regulates damage-inducible PCNA monoubiquitination, which then is proteolytically degraded to allow S phase progression and replication fork recovery in response to DNA damage.
Statistics
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PSSM-Id: 520651
Aligned: 43 rows
Threshold Bit Score: 97.2746
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005844336 221 GVVAGWEDRGEGEQGDSAASGA--------LDLDAFDSADELEmlggAVGAERVKEALQALGLKCGGTLRQRAERLMLTK 292
XP_049531857 223 GIAPGWEKVREVDDDAL-------------INLNEFGKWEDLT----YLGLDRLKAALQALGMKCGGTLEERAQRLFSSK 285
XP_002179108 500 DSLPSPESINSNSKYVDENIQKnptfepqeLDLESYQSAQDLE----DLGMDRLKGALAALGVKCGGTLQERAARLMSLK 575
CBN79786     550 GKTAGGDAEGEEGGGPRAP-----------VDLEEFSCATDLAa---RFGPNRLKEELMSKGVKCGGTHYQRAARLFSLK 615
XP_018647745 256 KELQNACENTSKETVQPLTD----------QQLREVDTAENLE----VFGLDVLKATLMALGLKCGGTLKERASRLFSIK 321
XP_011492442 304 QRPPDPQEFCNQSQQ---------------VDLSLVTSVQQLE----LLGPDVLKAELQRRGLKCGGTLQERAARLFSVR 364
2_pfamImport   1 QVQPA-------------------------VDLTTVTSVDQLE----VLGLDVLKEELRRRGLKCGGTLAERAGRLFSIR 51 
Q7T293       379 EISPSSSIPEEKSQVLSQVEDP--------LDLLSVSGPEQLE----ALGLERLKKELMERGMKCGGTLQERAARLFSVK 446 zebrafish
XP_003388495 326 GQPRVGDTNGAEIDQETIDR----------FDLDKFESIQELE----AVGPHLLKAVLQKLGLKCGGTLSERAHRLYSVK 391
EFX73055     293 PATPVGTPVTEQIAVPTPVEPTvf----lpINLDDFDSSKSLE----ALGLNHLKHELQRLGMKCGGSLPERASRLFSVK 364
XP_005844336 293 GKRLEELDKSLFAK 306
XP_049531857 286 DDKNQENERKRLQH 299
XP_002179108 576 GLEREDYPQRLLSR 589
CBN79786     616 RLAPEDYPQELFAK 629
XP_018647745 322 DLSPEQYPVKLLVK 335
XP_011492442 365 DFSPGQINPALLAK 378
2_pfamImport  52 GLPAEQVDPALLAK 65 
Q7T293       447 GLTPDQIDPSLLAK 460 zebrafish
XP_003388495 392 GLTVDQIDPSLFAG 405
EFX73055     365 GLSPDQIDPSLLAK 378
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