Conserved Protein Domain Family
CLU

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pfam13236: CLU (This model is not part of the current CDD release)
Clustered mitochondria
The CLU domain (CLUstered mitochondria) is a eukaryotic domain found in proteins from fungi, protozoa, plants to humans. It is required for correct functioning of the mitochondria and mitochondrial transport although the exact function of the domain is unknown. In Dictyostelium the full-length protein is required for a very late step in fission of the outer mitochondrial membrane suggesting that mitochondria are transported along microtubules, as in mammalian cells, rather than along actin filaments, as in budding yeast. Disruption of the protein-impaired cytokinesis and caused mitochondria to cluster at the cell centre. It is likely that CLU functions in a novel pathway that positions mitochondria within the cell based on their physiological state. Disruption of the CLU pathway may enhance oxidative damage, alter gene expression, cause mitochondria to cluster at microtubule plus ends, and lead eventually to mitochondrial failure.
Statistics
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PSSM-Id: 520625
Aligned: 103 rows
Threshold Bit Score: 129.217
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003324268  456 DWADEFAQARELPRK--SLAERILRERIWS----------------RLQSDFSMAATRGVISCSRGEVPALNPQ-EPE-- 514 
XP_004366335  169 EWNDRYHSIMEMDQT--TDLEQQQKYQLLC----------------ELVDEFRHVANDHAKVIINEKDKSNDQRsIPLan 230 
CBN78662       10 NWNELFQSALDLPED--TPDQCYRKWERMT----------------TVNRDFKAAAVTYGKTIISEYFLDLKHKsIKPne 71  
7_pfamImport    1 -WSERFHNALQLDEA--DSDQIQAKYTEIL----------------QVCQDFIDTASAIALVLVREFYLPARDKsILPat 61  
XP_020432276  970 dLNDRFQEVVLKFRDipSLDTNLYNLQEIStd------------llHISQDFIHIVKTYGRIIIEERFL--QEKtIKPks 1035
XP_003285573  756 DYNERFQEIM-------------EELRNIDcnslqsdkikvnsqfiALTQDFVYASSTFGKVIISERYLPNSEKtIPSid 822 
XP_004360452  713 DYNERFQEIM-------------EDLRKVDcnsiqndrirvnsqfiALTQDFVYASMTFGRVIISERYLPLREKtIPPid 779 
XP_003292008  346 pWNESFQQILDKPIK--SSEEELERNLNIS----------------NMSQLLANQAIKYVKTLVREVHLSPEDKtIKPyq 407 
XP_020432036  293 pWNESFQELLDRPVN--SHEEERVRNLNIS----------------HFSQILANTAKKYVKALVQEVHIAPELKsIKPfe 354 
XP_004359521  776 pWNESFQELLDKPVN--SLDEEKNRNTSIS----------------LFSTHLANTAMKYCKSLVQEVHMHPDHKsIKPmd 837 
XP_003324268  515 --------------SAWTYVLNNILFSRAEDPI----GAYEHLggTAAARAIASKDLHSIKYLNQLD--VPG----IYTM 570 
XP_004366335  231 qh---------giaGGEKYIVCNILFKFPVDKRgiygGS------TEKVQKTFGHELKSLNHYQEYSldGCI----IRFP 291 
CBN78662       72 nl--------ggsaGGMKFVWRGILFKLADGSRgpylGN------DEAAAKGAGHDLRGATHYLDARir------gLRYA 131 
7_pfamImport   62 espidgrkdnirrtSRLKYEAHDILFKVCTDDH----GRFENS--HEFAAKAGGHEVRNSAIYLRE----LSghgnVRIP 131 
XP_020432276 1036 lg---------ghlGGDKYIVRNVLFKFAGGSPhgv-------ygEWGGAKVGGQELKGCMATLNCPin------gLCVP 1093
XP_003285573  823 ig---------giaGGDKFIVHGILFKFAIDREdfygS-------DYASMCVSNHELKGLINVFNCNvs------hLCLP 880 
XP_004360452  780 ig---------glaGGDKFIVHGILFKFAIDKEnfygS-------DYAAGCVAGHELKGLINVFNAGik------dLSLP 837 
XP_003292008  408 ig---------gfaGGEKYKIDSMFIKFALNPFkiyeGNNTL---SYFANKSAGHELKSISVLLSCgl-------nLHVP 468 
XP_020432036  355 ag---------gfaGGEKFRIDNMFIKFALNPHqiyeRNNPV---SYFANKAAGHELKSINALVSCGvp------nLHFP 416 
XP_004359521  838 vg---------gfaGGEKYKIDNMFIKFALNPHsiyeKGNPV---SYFANKAAGHELKSINALVGCGip------nLHFP 899 
XP_003324268  571 GSAVVDYHGKRWIAQGMIPGIFRppdleaekaqqdlaaqqsqinghstpddkdeGdwekvnrslpvtpqlgtvavpeevs 650 
XP_004366335  292 LMVMIDYQGQRLLAQPVIPEIVPtgkd----------------------------------------------------- 318 
CBN78662      132 LQCLIDYKGFRMTAQAVLP-----------------------------------Vs------------------------ 152 
7_pfamImport  132 LQCTVDFQGFRVLCSSKLP-----------------------------------Ievvawtes--------------gdi 162 
XP_020432276 1094 LMALVDFMGYRLIAMSVLP-----------------------------------Issa---------------------- 1116
XP_003285573  881 LMALVDYRGFRLIAMSILP-----------------------------------Ve------------------------ 901 
XP_004360452  838 LMALVDYRGFRVIAMSILP-----------------------------------Vd------------------------ 858 
XP_003292008  469 LICLLNYRGFRLSVISELP-----------------------------------It------------------------ 489 
XP_020432036  417 LMCLLNYRGFRLIVISELP-----------------------------------In------------------------ 437 
XP_004359521  900 LMCLLNYRGYRLIVISELP-----------------------------------Is------------------------ 920 
XP_003324268  651 ppttYDILYGSADIEkpeMGLRS-DPKFHRLAAQVAAGFNLSEHD------------VIDVNG----RTHRLWLSADVHG 713 
XP_004366335  319 --qpsTIRYGTDVGG---VPIECnDELIIVPLYDLAAKLNLENHIh---------------------fNQVVATPFDTEI 372 
CBN78662      153 ---sETLRYGSSDAG---RTVHNdSENLAKKLKAVAKKLNLRTHWv---------------------nDKEMYSACDIEG 205 
7_pfamImport  163 qrvsKQLVHGSDNRG---KTVTFqNKELDEALASVASRLNLSRHSargy---------------edltSKSINAAADMLG 224 
XP_020432276 1117 -idaSTIVYGSSDMG---LTVHAlHEPSLEVMKQLSQSLNLKAHYggt-----------------qkpPSLVYSATDVEG 1175
XP_003285573  902 ---kDSICYGSNDYG---LTIHNsDAFLSSKVKEVANLLNIKSHHsgd------------------kgT-FLHSPADLEG 956 
XP_004360452  859 ---kDSIIYGSNDYG---MTIHNsDKYLSERLEECAKLLNIKSHHcge------------------qgT-QVHSPADLEG 913 
XP_003292008  490 ---sNTIVFGSSNAG---ATIHD-NETVSKMMVKIGEILNLKAHDakenqkspplisSNNSESkkppKQVKIPLAIDIEG 562 
XP_020432036  438 ---sNTLVFGSSNAG---ETIKE-NDTVFKMMVKIGEILNLKTHLveerg-------------kinsAKFTIPLAIDIEG 497 
XP_004359521  921 ---sTTMVFGSANAG---VTIHE-NDTVRMMMVKIGEILNLKEHLveenls----------sptrtgKMYSIPLAIDIEG 983 
XP_003324268  714 IRA-TDGRCYLIDLYRMAPLDVS 735 
XP_004366335  373 HQTpSDNSYYILDLARTFPPCyf 395 
CBN78662      206 HVG-EGGSHYLLDFARSFPPEsp 227 
7_pfamImport  225 YLN-GQKQLVLVNFARAMPPE-- 244 
XP_020432276 1176 HIG-TDGRFYLVDFSRTFPPTYp 1197
XP_003285573  957 HRG-FDGRYYLLDFARLFAAEap 978 
XP_004360452  914 HDG-FDGRYYLLDFARLFPPEAp 935 
XP_003292008  563 HYG-TDGRYYIVDSARLLPPEkp 584 
XP_020432036  498 HFG-HDGRYYVVDTARLFPPETP 519 
XP_004359521  984 HFG-YDGRYYLVDSARLFPPETp 1005
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