Conserved Protein Domain Family
TerB_N

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pfam13208: TerB_N 
TerB N-terminal domain
The TerB_N domain is found N-terminal to TerB, and TerB_C containing proteins. It has a predominantly alpha-helical structure and contains an absolutely conserved glutamate. The presence of a conserved acidic residue suggests that it might chelate metal like TerB. These proteins occur in a two-gene operon containing an AAA+ ATPase and SF-II DNA helicase suggesting a role in stress-response or phage defence.
Statistics
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PSSM-Id: 493198
Aligned: 25 rows
Threshold Bit Score: 147.111
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015924481     614 SKNLPVTPKPEKREFIRDiqelnicvtSKHTGYiqsdyyEK--AYRFLERARSFEHykAD-SAKYVPFSCEW--PTYDSM 688  Ruminiclos...
jgi:Mpe_B0328     64 VIRAGGLEI-GGMVYFGT---------PPAGGS------GA--ELSLIDPTLQVAA--VG--DFFRVSLALR--ASYKAL 119 
WP_012938172      29 PRK-PPAPLPETLQQLRAme-----kdGESRYE------TT--PELFVRQGMAAAAyeDD-TVYDLPVLHYY--PTYRVL 91   Acidaminoc...
Q5FLS0           141 NNFKKKPLATDRIHQMQE----------LYDYSvlp-svGR--YKNFYNQGKFMADyeDD-YSDYAAFRRFY--PTYHDM 204  Lactobacil...
WP_013624091      71 GPQSEPYATFKKMRQIGG---------VREGYLsy--yaDD--AEIFCKQAQLMKDftDD-DDRKIPLDPYC--ATYLKM 134  Syntrophob...
jgi:Clocel_0826  132 GEQESRQAIPARPSYEQE------------GFRisfsvdKQ--REKFFRDMKKYSSk-EGkKVLFVPFMTYW--PTYDSM 194 
WP_012447977     123 FIKNEIERLSKDKQGDNH---------SQDNEIrvtvriEGlgDEKFVKDSLKYKSt-PGfETEFVPLYKYW--TTFESL 190  Natranaero...
Q24ZT3           645 ENTIQVSSVKGNLEFALSiets--slnSYGGY-------YN--GGRFLQEAKQLVEhvEH-RAKFIPFMSYW--PTYSSM 710  Desulfitob...
BAL95136         125 TVEVRGLVLPGLLSVALK----------PPPKGvvl-hpAT--VAAWMPADLGVPT------DGVEPIRDVWsiPSYASL 185 
WP_012400572      55 TVDIHGLDVSGGLFYTGD---------VQRSHAd-----SI--EACVIDARFDVAR--EG-ANPSAGLGSVA--LSYDGF 113  Paraburkho...
WP_015924481     689 SIHQREWYFWWREQVRMGlyLETDLSYVLVYIYELVNLVGVSdpiDGYEKLYTIWEIYrn-kyLKLDFHLLEWIMDYiII 767  Ruminiclos...
jgi:Mpe_B0328    120 TPAERRGYLAWLAQGRNH--PDVDARLVFLYFYGLERRLTVDv-hEGKCSPAEIPALL-----EELDRLRAVYGAREqAL 191 
WP_012938172      92 TDQELRGYFGWRTRLRHQqlERTSLTYAFLYIYELLNQIGVEnpqDGYDKLKSFGDNYgm-ldDRILPYLHQWLRDYvLY 170  Acidaminoc...
Q5FLS0           205 KIEQLRSYFAWRTQLRKGnyQKVSTSYAYVYIYELLNNIGVKsaqDGYQKLIDFKENYvekfdLSIEPYLNDWLKDYvLF 284  Lactobacil...
WP_013624091     135 DDAQLRTYFTWRTKVRQGviEDTSLSYAFCYVFELLNDVGVSspaEAIGKLIALWTAFrr-ydEKIDVYLREWIRDYyVV 213  Syntrophob...
jgi:Clocel_0826  195 DGQQQAWYFYWRSQVREEnyIDTGLSYIFVYIYELLSGIGWTapqEGLVKLSSIWTRYre-rfSKLDRYMPDWIFDFtQL 273 
WP_012447977     191 DENQKQWYFYWREQVVKGnfLDTDLSYIILFTYELINYTFNLnaaFNVSMMVQLYEAYkd-rvPKINNYLPTWIHDM--- 266  Natranaero...
Q24ZT3           711 SMEQQKWYFYWRGQVRKGsyPDTDLSYIFVHVYELINNVGVQnpqDGYQQLFNLWINYre-ryPKLDHYLVDWLTDYvAM 789  Desulfitob...
BAL95136         186 TVAQRGLYLKWLASGRE---LSVPAHLALLFVCGLESRVVEAgptALADEERRAIA-------WASRDVVARFGSALpQL 255 
WP_012400572     114 TPEQRRTYLEWLASDRRK--SDINTGYLFFYLYGLERRVLVDg-aAGKVGADEFNAIG-----KELRRLINL-DANY-GW 183  Paraburkho...
WP_015924481     768 N--DCP-IDFIEILKDNISRCpyfhLPDFLIPYYTDeELSKMSTTLIARFIDYPLKkskfy----tgihQELLDKYIPRA 840  Ruminiclos...
jgi:Mpe_B0328    192 A--TAV-ESLSYWVQNTGCPP-----ALYAQKDPAFrKAHGLRAYTQIAVGQAAAA-------------GVPLSASLART 250 
WP_012938172     171 W--QLD-PKLLPETKRSRQDE-----AYLVLENYKNvSDQEL-FEALDLFSTYHISrsrl-----ykqqPEDTIRLLGRI 236  Acidaminoc...
Q5FLS0           285 Y--ELD-QKLIEENFEDEIAQd---HDYIVLHDPESfSAKELAEVFARKTSYWNTSkti-------knnSEVFAKVLRCV 351  Lactobacil...
WP_013624091     214 HkpQFA-VEFTDLSRGFPVPYhs-eDV--ALLAKAKsCSWDD-LRVIEASSSFRITngqfy----katdQAMIEKCACFV 284  Syntrophob...
jgi:Clocel_0826  274 HklEYMsPVEKDYIHLMPSVV-----TDILIDRHSEeVPLKLSFSLIETLTDYAIVnskfy----kdgnQELIKEAIPRV 344 
WP_012447977     267 ---LIE-LDEKELAQSWGTYTrrsrNPYEKF-YKTFkKHKD--DISKISMNQWNSIiqrynetkffknnKKKVYTTFKKA 339  Natranaero...
Q24ZT3           790 F--GCN-VDLLEVYQHLDHKNadpdYLNIILTGYKKsGIGRLSLELINQIADYSIFrskfy----nesgQTLLVEYIPKT 862  Desulfitob...
BAL95136         256 R--EHC-LNLAGFLDAVDAPA-----RWYLLDVPELaETYDPSAPLQVALGQAARD-------------GAFLPPAWALA 314 
WP_012400572     184 Q--KHV-RALIDALSLMASRHt---RMYLQAAPDGLaTGYQVPLNVRVAFGQAALD-------------QHPLPADWALA 244  Paraburkho...
WP_015924481     841 IAEVNFYLKDRFGK 854  Ruminiclostridium cellulolyticum
jgi:Mpe_B0328    251 WSIEAGSSYLRADV 264 
WP_012938172     237 YRMIQAYWESHRKK 250  Acidaminococcus fermentans
Q5FLS0           352 WQELLLSKKYGIAY 365  Lactobacillus acidophilus
WP_013624091     285 IQELAKLFKSGGVD 298  Syntrophobotulus glycolicus
jgi:Clocel_0826  345 IALVDVVLRKKKQK 358 
WP_012447977     340 LKLFQEENKEEGQD 353  Natranaerobius thermophilus
Q24ZT3           863 IEKVNAFLLEKHHG 876  Desulfitobacterium hafniense Y51
BAL95136         315 SVLSDVRVPKKTPV 328 
WP_012400572     245 WVKLDPMMVRRTAV 258  Paraburkholderia phymatum
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