Conserved Protein Domain Family
TerB_N

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pfam13208: TerB_N (This model is not part of the current CDD release)
TerB N-terminal domain
The TerB_N domain is found N-terminal to TerB, and TerB_C containing proteins. It has a predominantly alpha-helical structure and contains an absolutely conserved glutamate. The presence of a conserved acidic residue suggests that it might chelate metal like TerB. These proteins occur in a two-gene operon containing an AAA+ ATPase and SF-II DNA helicase suggesting a role in stress-response or phage defense.
Statistics
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PSSM-Id: 493198
Aligned: 25 rows
Threshold Bit Score: 147.111
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015924481   614 SKNLPVTPKPEKREFIRDiqelnicvtSKHTGYiqsdyyEK--AYRFLERARSFEHykAD-SAKYVPFSCEW--PTYDSM 688  Ruminiclostr...
jgi:Mpe_B0328   64 VIRAGGLEI-GGMVYFGT---------PPAGGS------GA--ELSLIDPTLQVAA--VG--DFFRVSLALR--ASYKAL 119 
WP_012938172    29 PRK-PPAPLPETLQQLRAme-----kdGESRYE------TT--PELFVRQGMAAAAyeDD-TVYDLPVLHYY--PTYRVL 91   Acidaminococ...
Q5FLS0         141 NNFKKKPLATDRIHQMQE----------LYDYSvlp-svGR--YKNFYNQGKFMADyeDD-YSDYAAFRRFY--PTYHDM 204  Lactobacillu...
WP_013624091    71 GPQSEPYATFKKMRQIGG---------VREGYLsy--yaDD--AEIFCKQAQLMKDftDD-DDRKIPLDPYC--ATYLKM 134  Syntrophobot...
WP_010076569   132 GEQESRQAIPARPSYEQE------------GFRisfsvdKQ--REKFFRDMKKYSSk-EGkKVLFVPFMTYW--PTYDSM 194  Clostridium ...
WP_012447977   123 FIKNEIERLSKDKQGDNH---------SQDNEIrvtvriEGlgDEKFVKDSLKYKSt-PGfETEFVPLYKYW--TTFESL 190  Natranaerobi...
Q24ZT3         645 ENTIQVSSVKGNLEFALSiets--slnSYGGY-------YN--GGRFLQEAKQLVEhvEH-RAKFIPFMSYW--PTYSSM 710  Desulfitobac...
BAL95136       125 TVEVRGLVLPGLLSVALK----------PPPKGvvl-hpAT--VAAWMPADLGVPT------DGVEPIRDVWsiPSYASL 185 
WP_012400572    55 TVDIHGLDVSGGLFYTGD---------VQRSHAd-----SI--EACVIDARFDVAR--EG-ANPSAGLGSVA--LSYDGF 113  Paraburkhold...
WP_015924481   689 SIHQREWYFWWREQVRMGlyLETDLSYVLVYIYELVNLVGVSdpiDGYEKLYTIWEIYrn-kyLKLDFHLLEWIMDYiII 767  Ruminiclostr...
jgi:Mpe_B0328  120 TPAERRGYLAWLAQGRNH--PDVDARLVFLYFYGLERRLTVDv-hEGKCSPAEIPALL-----EELDRLRAVYGAREqAL 191 
WP_012938172    92 TDQELRGYFGWRTRLRHQqlERTSLTYAFLYIYELLNQIGVEnpqDGYDKLKSFGDNYgm-ldDRILPYLHQWLRDYvLY 170  Acidaminococ...
Q5FLS0         205 KIEQLRSYFAWRTQLRKGnyQKVSTSYAYVYIYELLNNIGVKsaqDGYQKLIDFKENYvekfdLSIEPYLNDWLKDYvLF 284  Lactobacillu...
WP_013624091   135 DDAQLRTYFTWRTKVRQGviEDTSLSYAFCYVFELLNDVGVSspaEAIGKLIALWTAFrr-ydEKIDVYLREWIRDYyVV 213  Syntrophobot...
WP_010076569   195 DGQQQAWYFYWRSQVREEnyIDTGLSYIFVYIYELLSGIGWTapqEGLVKLSSIWTRYre-rfSKLDRYMPDWIFDFtQL 273  Clostridium ...
WP_012447977   191 DENQKQWYFYWREQVVKGnfLDTDLSYIILFTYELINYTFNLnaaFNVSMMVQLYEAYkd-rvPKINNYLPTWIHDM--- 266  Natranaerobi...
Q24ZT3         711 SMEQQKWYFYWRGQVRKGsyPDTDLSYIFVHVYELINNVGVQnpqDGYQQLFNLWINYre-ryPKLDHYLVDWLTDYvAM 789  Desulfitobac...
BAL95136       186 TVAQRGLYLKWLASGRE---LSVPAHLALLFVCGLESRVVEAgptALADEERRAIA-------WASRDVVARFGSALpQL 255 
WP_012400572   114 TPEQRRTYLEWLASDRRK--SDINTGYLFFYLYGLERRVLVDg-aAGKVGADEFNAIG-----KELRRLINL-DANY-GW 183  Paraburkhold...
WP_015924481   768 N--DCP-IDFIEILKDNISRCpyfhLPDFLIPYYTDeELSKMSTTLIARFIDYPLKkskfy----tgihQELLDKYIPRA 840  Ruminiclostr...
jgi:Mpe_B0328  192 A--TAV-ESLSYWVQNTGCPP-----ALYAQKDPAFrKAHGLRAYTQIAVGQAAAA-------------GVPLSASLART 250 
WP_012938172   171 W--QLD-PKLLPETKRSRQDE-----AYLVLENYKNvSDQEL-FEALDLFSTYHISrsrl-----ykqqPEDTIRLLGRI 236  Acidaminococ...
Q5FLS0         285 Y--ELD-QKLIEENFEDEIAQd---HDYIVLHDPESfSAKELAEVFARKTSYWNTSkti-------knnSEVFAKVLRCV 351  Lactobacillu...
WP_013624091   214 HkpQFA-VEFTDLSRGFPVPYhs-eDV--ALLAKAKsCSWDD-LRVIEASSSFRITngqfy----katdQAMIEKCACFV 284  Syntrophobot...
WP_010076569   274 HklEYMsPVEKDYIHLMPSVV-----TDILIDRHSEeVPLKLSFSLIETLTDYAIVnskfy----kdgnQELIKEAIPRV 344  Clostridium ...
WP_012447977   267 ---LIE-LDEKELAQSWGTYTrrsrNPYEKF-YKTFkKHKD--DISKISMNQWNSIiqrynetkffknnKKKVYTTFKKA 339  Natranaerobi...
Q24ZT3         790 F--GCN-VDLLEVYQHLDHKNadpdYLNIILTGYKKsGIGRLSLELINQIADYSIFrskfy----nesgQTLLVEYIPKT 862  Desulfitobac...
BAL95136       256 R--EHC-LNLAGFLDAVDAPA-----RWYLLDVPELaETYDPSAPLQVALGQAARD-------------GAFLPPAWALA 314 
WP_012400572   184 Q--KHV-RALIDALSLMASRHt---RMYLQAAPDGLaTGYQVPLNVRVAFGQAALD-------------QHPLPADWALA 244  Paraburkhold...
WP_015924481   841 IAEVNFYLKDRFGK 854  Ruminiclostridium cellulolyticum
jgi:Mpe_B0328  251 WSIEAGSSYLRADV 264 
WP_012938172   237 YRMIQAYWESHRKK 250  Acidaminococcus fermentans
Q5FLS0         352 WQELLLSKKYGIAY 365  Lactobacillus acidophilus
WP_013624091   285 IQELAKLFKSGGVD 298  Syntrophobotulus glycolicus
WP_010076569   345 IALVDVVLRKKKQK 358  Clostridium cellulovorans
WP_012447977   340 LKLFQEENKEEGQD 353  Natranaerobius thermophilus
Q24ZT3         863 IEKVNAFLLEKHHG 876  Desulfitobacterium hafniense Y51
BAL95136       315 SVLSDVRVPKKTPV 328 
WP_012400572   245 WVKLDPMMVRRTAV 258  Paraburkholderia phymatum
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