Conserved Protein Domain Family
DUF4004

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pfam13171: DUF4004 (This model is not part of the current CDD release)
Protein of unknown function (DUF4004)
This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are approximately 210 amino acids in length.
Statistics
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PSSM-Id: 520596
Aligned: 15 rows
Threshold Bit Score: 244.874
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5KY54         4 ELISKKELLELTGISYGQLYRWKRKKLIPEEWFIRKSTFTGQETFFPKEKILARIEKIKELKDELSLDELAGVFAPSPAA 83  Geobacillus kau...
2_pfamImport   1 DMISKKDLLALTGISYGQLYRWKRMGLIPEDWFVRRATYTGQETFFPREKILARLEKILKMKDGASLQELADLFSPSPDQ 80 
WP_237899556   4 NVISKKDLLELTGISYGQLYRWKRKNLIPEEWFIRRATFTGQETFFPREQILARIDKILNMKDDLSLDELADMFSPSMSD 83  Brevibacillus b...
WP_014095949   4 DLISKKDLLEQTGISYGQLYRWKRKNLIPEDWFIRKSTFTGQETFFPRERILERIEKIQAMKENLSLDALAEMFAPGGGK 83  Heyndrickxia
Q65M48         5 DLISKKELLDLTSISYGQLYRWKRKNLIPEEWFIRKSTFTGQETFFPREDILKRIETIQSMKENLSLDEMAEMFSPDLTE 84  Bacillus lichen...
P97032        29 QLISKKELLERTSISYGQLYRWKRKNLIPEEWFIRKSTFTGQETFFPREEILKRISMIQKMKENLSLDEMREMLSPKMKD 108 Bacillus subtil...
WP_012811737   4 ELISKKELLDLAGISYGQLYRWKRKKLIPEEWFIRKATFTGQETFFPRDKILSRIEQIKQWKEDVPLDELAKRLSPAGVE 83  Alicyclobacillu...
WP_015617428   4 KLISKKELLELTGISYGQLYRWKRKNLIPEEWFIKKSAFTGQETFFPREKILDRLEKIKNMKDDASLDDLAQIFSPEVSD 83  Clostridium pas...
Q97TR1         5 NLISKKELLEITHISYGQLYRWKRKKLIPEEWFIKKSSFTGQETFFPKNEILDRIEKIKSFKGDVSLDELANIFSPNLSE 84  Clostridium ace...
WP_012655944   3 DLISKKELLKVCDISYGQLYRWKRKKLIPEDWFIRKSTYTGQEAFFPRSKMIERIEMIKTLKDDHALDDLYKVFK----- 77  Macrococcoides ...
Q5KY54        84 VVLTKEEIVKRHIVSDLVM-----QWLDDEWGG--RQD--VSFAELLSLYIVDRLLRSgeISIEEGKNIWMMFKSHYPKL 154 Geobacillus kau...
2_pfamImport  81 VRLTAGQACARGVAPAAVF-----EVFASYHETppAPEilFDFDTLLFVRVLGQLLKQ--IGVEEGRALYALFCAQYPAF 153
WP_237899556  84 TSLTAEELLARNIVSTTSL-----EVFNVFLGS--LRT--FTFQQALYAYVLEKLLAAgdLSVDEGGGLLQVLASHYPKF 154 Brevibacillus b...
WP_014095949  84 -RISKADILKRGIASDFVL-----NFYIDQTQA--QEQa-FPFEEVLAIFLLEKLLHGgeISLEEGKMLVGLLQDAEKSF 154 Heyndrickxia
Q65M48        85 LNASRGELLKKGIVSEAVM-----AFFEECTGK--RDHp-FNLTEALAAYVLEGLLQSgdISLDEGKMVLDVIMSNEAEN 156 Bacillus lichen...
P97032       109 VSMTADELLHKGLVSRPAL-----EAYSEDGGSp-----vFSSSDLLSLFVLEGLLQSgnVSLAEAKMAAEVLKKHDTEE 178 Bacillus subtil...
WP_012811737  84 IERTGEDLVRLGVVSDLAW-----RLYADAVPN--ARM--LAFPDIVCVYLVHEALESgqVSLDEARQLVQAYDRIVTVF 154 Alicyclobacillu...
WP_015617428  84 IKISYEELIEKNIIMKNVI-----DIYIDFNSM--IDL--YSFNEILYMSVLQEFLLEgsISIEESKNLLQTLQDNYDKY 154 Clostridium pas...
Q97TR1        85 LSLEKKEMLEQNIVSQTIM-----NLYTSIHEN--SNN--FSFNELLFMTILDRFLKSgkTSLEEGKLILHTLEENYKNF 155 Clostridium ace...
WP_012655944  78 ---EDYEVIEQRDYNSSLFeehywEIADSIFTK--RNS--VSHNEGMTLMFIELALNSgyFSKEEVLESAVIYHQN---- 146 Macrococcoides ...
Q5KY54       155 QGKSCELVVLRKMGVTVSFLVEGTAALHVEEGAKLIARLHVPTY 198 Geobacillus kaustophilus
2_pfamImport 154 RGAPCELVAVRKLGVCIGFLVRAPFEAAFEEGAQVLARIDLAAQ 197
WP_237899556 155 EGKPCELIFMRKMGISTFVLVSGSTEMYFDSGVKVVKRLDLANY 198 Brevibacillus brevis
WP_014095949 155 ATEGTNVWLIRKFGVSTCFLTKKAEDILFDREAKVIVNLDLMEL 198 Heyndrickxia
Q65M48       157 KGR---LLVLRKLGVATCLIAEG--SIVLEKGVKVAADINLAAS 195 Bacillus licheniformis DSM 13 = ATCC 14580
P97032       179 IEKQTELIVLRKLGVTTCFIAAAADSILFESSVKVVERVDLLKA 222 Bacillus subtilis subsp. subtilis str. 168
WP_012811737 155 CDMQMRIDLVRKFGVGIWLARAPNAEIALDPQANVAFSVDVASA 198 Alicyclobacillus acidocaldarius
WP_015617428 155 IGRSCEIVFVRKMGVGITSILSVPNEIYFDKLSKVVMKISVNEA 198 Clostridium pasteurianum
Q97TR1       156 DDRYCDVVLIRKLGIAICFLMLIPNEIYIENTASLVLKVNAREC 199 Clostridium acetobutylicum
WP_012655944 147 EMKDVNYYFVRAMGV--FMLICAKEIVKISDNAKIIYELDDTKI 188 Macrococcoides caseolyticum
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