Conserved Protein Domain Family
Nterm_IS4

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pfam13006: Nterm_IS4 
Insertion element 4 transposase N-terminal
This family represents the N-terminal region of proteins carrying the transposase enzyme, DDE_Tnp_1 (that was Transposase_11), pfam01609, at the C-terminus. The full-length members are Insertion Element 4, IS4. Within the collection of E.coli strains, ECOR, the number of IS4 elements varies from zero to 14, with an average of 5 copies/strain.
Statistics
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PSSM-Id: 493075
Aligned: 26 rows
Threshold Bit Score: 98.0891
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2JAY9        18 RVTVGVLTRVYPPELVDRVLAVTDTAEVRRRLLPSWLVVYFVLALWLFRGRncGYVQVLARLTSGLHFQrraavlaagga 97  Frankia casuarinae
WP_013317037  15 PEHACSLSDLIPIELIHQAFTLTDTVTLRKRKLPLESMIWLVVGMSIFCNR--PMTEIVNLMDITDRTG----------- 81  Dickeya dadantii
Q32FF6        23 RNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALERKE--PLHQIVNRLDIMLPGN----------- 89  Shigella dysent...
Q6D540        17 RNPLSTLAEVLDPELVARCLEEAGTVTLRKRRLTTDMMVWCLIGIALERKE--PLHQIVNRLDILPPGN----------- 83  Pectobacterium ...
Q5QU56        15 PDDFSKLPDLLEPELIEQCLEDAGVTTVRKRRLPMDFMVWAVVGMALFREM--PMRQLVSHLDLMLPGK----------- 81  Idiomarina loih...
Q8E9X7        15 LTEFTCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMALFRGE--SVRSLINKLDIVLPQE----------- 81  Shewanella onei...
WP_014290740  15 TVEFHSLAEVLDPEIIQACLASNGVATVRKRKLPMEAMVWAVIGMALFRGD--SVRQLINKLDIVLPQE----------- 81  Oceanimonas sp....
WP_012827472  16 PEEFSRLARDVAPEWIEQALEATGTATLRRRRLPMEQLVWLVIGMALFRDR--PITEVVTSLDLALPSP----------- 82  Haliangium ochr...
WP_012404963  15 PADLSRLAEHLPYEWIERAVQATGAASIRRRRLPAEQVVWLVIALAMYRHW--SISEVLDSLDLALPNE----------- 81  Paraburkholderia
P30192        20 SAQL--FAEHLPTEWIQHCLTLSAHATVRRRRLPGDMVIWMVV-----QNE--PITDVVRRLNLSADGE----------- 79  Escherichia col...
Q2JAY9        98 ggAGWSLPASPSLGEARARIGSDPVRMLFE 127 Frankia casuarinae
WP_013317037  82 --A--PFTARSSVIQRRKTLGEDAVRELFD 107 Dickeya dadantii
Q32FF6        90 --R--PFVAPSAVIQARQRLGSEAVRRVFT 115 Shigella dysenteriae Sd197
Q6D540        84 --R--PFVAPSAVVQARQRLGSEAVRLVFE 109 Pectobacterium atrosepticum
Q5QU56        82 --R--PYVAPSAVVQARQRLGANVMKRMFE 107 Idiomarina loihiensis
Q8E9X7        82 --I--DYVARSAVTQARKRLGSEVVREVFS 107 Shewanella oneidensis
WP_014290740  82 --V--DSVVRSAVTQARKKLGSDVVRDIFR 107 Oceanimonas sp. GK1
WP_012827472  83 --GH-PEVAPSAVAQARDRLGESPMAWLFA 109 Haliangium ochraceum
WP_012404963  82 --AA-PFVSKSAVVQARQRIGEAPMAWLFE 108 Paraburkholderia
P30192        80 --AGMNLLARSAVTQARQRVGAAPVEWLFR 107 Escherichia coli K-12
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