Conserved Protein Domain Family
DUF3876

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pfam12992: DUF3876 (This model is not part of the current CDD release)
Domain of unknown function, B. Theta Gene description (DUF3876)
Based on Bacteroides thetaiotaomicron gene BT_0092, a conserved protein found in a conjugate transposon. As seen in gene expression experiments , it appears to be upregulated in the presence of host or other bacterial species vs when in culture.
Statistics
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PSSM-Id: 520555
Aligned: 6 rows
Threshold Bit Score: 141.828
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8A5A2         4 TNeDYPSFNLFSIVGTWESVNLNPTVIIYRNGKEYLLSIVYVSETTKQASPATYEIQQDGSQYFIATASkRLSVDYDPAK 83  Bacteroides the...
1_pfamImport   1 SC-DVADNRRDMLCGNWESVEGKPDVLIYKEGEAYKVTVFRRSGLRRKLKPETYLLQEENGNLFMNTGF-RIDVSYNEAT 78 
5_pfamImport   1 SCsESRFKDCDRLCGSWSSVEGKPDVLIYKEGDAYKVTVFARSGKTRKLKPETYLLVEENGNLFINTGY-RIDIAYNEAA 79 
4_pfamImport   1 SCsESGIDR-DKICGTWTSVEGRPDVLVYKEGECYKVTVFSRSGRTRRLKPQTYLLVEENGNLFVNTGY-RVDVSYNEAA 78 
WP_010992393  21 SCkETNADRLRAMRGDWESVKNRPAFSLFEENGHYRVTTYRKT-YWGTVQTETYQISEQDGNLFIETGL-SVLLTYDKEN 98  Bacteroides fra...
WP_010992658  22 SCkETNAERLEKMCGEWVSTGGKPPFTLWEEDGRYRVTVMHRN-HTGGSEAETYLVRETEGVLFIETGF-AVMMDYDREK 99  Bacteroidales
Q8A5A2        84 DVLSISSLGDYLR 96  Bacteroides thetaiotaomicron
1_pfamImport  79 DVLTFSPNGDYVR 91 
5_pfamImport  80 DVLTFSPNGDYVR 92 
4_pfamImport  79 DVLTFSPGGDYVR 91 
WP_010992393  99 DRILLSPGGEYKR 111 Bacteroides fragilis
WP_010992658 100 DRIRLSPGGEYRR 112 Bacteroidales
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