Conserved Protein Domain Family
DUF3875

?
pfam12991: DUF3875 
Domain of unknown function, B. Theta Gene description (DUF3875)
Based on Bacteroides thetaiotaomicron gene BT_4769, a conserved protein found in a conjugate transposon. As seem in gene expression experiments . It appears to be upregulated in the presence of host or other bacterial species vs when in culture.
Statistics
?
PSSM-Id: 493062
Aligned: 11 rows
Threshold Bit Score: 84.7765
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_015056736   2 KKSKSLAQLFPILCIdePTGCLVSKNADITAAFELQALEIFAVSDGEYDALH 53  Fibrella aestuarina
1_pfamImport   3 LKAETLERRFPLLSV--ENGCIVSKDADLTVAFEVELPELYTVTEDEYETMH 52 
WP_008503816   2 aQAIDIERVLPIYRI--ENDCLLSVQGDITVAYEVTLPEIFSLSNEEYEAFH 51  Mucilaginibacter paludis
Q7MUM7         5 RKKCELEEKFPLLAI--ENGCIVSKDADITVAFSLELPELFTVTSPEYAAMH 54  Porphyromonas gingivalis
CCZ88170       5 LKACDLEDRFPILAV--ENNCIVSKDADITVAFEVELPELYTVTAAEYEAIH 54 
WP_013997382   5 SKISALESKFPILAI--ENDCLLSKEADITIGFSVQLPELFTLSGEDYQLLH 54  Capnocytophaga canimorsus
WP_014791691   5 SKTATLEHKFPLLAI--EEACVLSKEADISIGFKIALPELFTISSNDYDNLH 54  Ornithobacterium rhinotracheale
WP_013407017   5 AKTTTLESKFPLLAV--ENNCILSKDADITACFEVRLPELFTVASAEYEAIH 54  Leadbetterella byssophila
Q89YG3         5 LKASTLESKFPIMAV--EHDCIVSKDADITVAFRVTLPEVFSVSSAEYEAMH 54  Bacteroides thetaiotaomicron
EGJ72282       5 MKAATLESKFPLLAV--EHDCIISKDADITVAYKVELPEIFTISSDEYEAIH 54 
WP_013760810   5 SKITILESKFPLLSV--EHGCIVSKDADVTVAFRVELPELFTVTSAEYETMH 54  Porphyromonas asaccharolytica
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap