Conserved Protein Domain Family
DUF3873

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pfam12989: DUF3873 (This model is not part of the current CDD release)
Domain of unknown function, B
Theta Gene description (DUF3873). Based on Bacteroides thetaiotaomicron gene BT_2286, a putative uncharacterized protein. As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2231), it appears to be upregulated in the presence of host or other bacterial species vs when in culture.
Statistics
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PSSM-Id: 493060
Aligned: 4 rows
Threshold Bit Score: 90.3688
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCX44595  2 TRMTQNGISTT-QKGQEQYETFYSAHRGKRISRVMYDYRTE-GGELFSVVAPTLKECRQKRDEWLAkKK 68 
CCX47242  3 TKLTANGVSTTtTPGTEQYEVFYTGYRSRRKKHYQYDYRHT-DGELFSCVAGTLKECRRRRDEWLN-KK 69 
Q8A5F3    3 TKMNENGVSTCkTG--EKYEKFQMTVGRKRRTFYHYDYRDTaDNELFSCVKPTLEECRRQCNEWLKkKE 69  Bacteroides thetaiotaomicron
Q8ABM9    2 ETLNKNGVSITqTPGEEKYVKCCLGAFRGQI-YYQYDYCHF-NDNLFSILGKYY----RLQNDWLKtQK 64  Bacteroides thetaiotaomicron
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