3N5L


Conserved Protein Domain Family
Phosphonate-bd

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pfam12974: Phosphonate-bd (This model is not part of the current CDD release)
ABC transporter, phosphonate, periplasmic substrate-binding protein
This is a family of periplasmic proteins which are part of the transport system for alkylphosphonate uptake.
Statistics
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PSSM-Id: 520550
Aligned: 78 rows
Threshold Bit Score: 133.548
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3N5L_A         8 FGIISTESSQNLKSIWEPFLKDXSQQT---GYQ---VKAFFAPDYAGIIQGXRFDKVDIAWYGNKAAXEAVDRA-Hg-EI 79  Pseudomonas aer...
4_pfamImport   1 MVWLPDNSSADLTSSREAIGAAITAAC---GRE---ANLLTTTDYNVAIESIASGKAQMALLGPEGYVQANKKN-P--KV 71 
Q5UW70       126 FAMTPTEDPAVYRDTMQPLMDNIAEET---GKS---VKYFPLNSYASQVEAMRSERLHVAGFSTGPTPFAVNLA-Ga-VP 197 Haloarcula mari...
CAL60853      37 FSFVPQNDVQTEVDALQPLFDELQLAI---GMP---VDVVAPSSYGAVIEGLLAGTVDLARLGPAAYISAKKQDpGi-IA 109
Q73N00        29 MVFLPNESSDAMKDARQAFMEIISEAV---GRP---VEIKTTTDYNIALEAIISGNADMAYIGAEGYINAHKRN-PaiVP 101 Treponema denti...
Q8CUY1        37 IVWYPNESGNELKAARDEIGNVIEEET---GKE---VEHHLTTDYAIAIETIANDNAELAFMGAQGYIEANSKNdAv-KP 109 Oceanobacillus ...
WP_015883163  48 LGLVPSVEVDALTEDASELAAMLSDEL---GVE---VEAEVTTDFTALVVAMGTGQADIGMFGPIALVNAVDQS-Da-VA 119 Beutenbergia ca...
Q9K8N2        49 MGFVPSSESDQIADTVEPLAERLSEEL---GIP---VSGQVMTNYTGLVEAMGNDQVHIGFIPAFGYVLATDRYpQv-EV 121 Bacillus halodu...
WP_012199476  44 VYFVPSREPAEIVTATEPLKEMLKTELakeGYDiadVDITVGTSYEAVGEALSAGTADIGLIPGGTYVLYDDGA-Ev-LL 121 Lachnoclostridi...
Q9CIQ7        44 ISFIPSKNPDDITTATKPIANILKSELkkqGYTvknIDTSVGTNYQAVGEGLDAGSVDVGYGMSATTYAMY-QD-Gs-TP 120 Lactococcus lac...
3N5L_A        80 FAQT------------VAa-----SG---AP-------------------GYWSLLIANKDS--K-I------------- 104 Pseudomonas aer...
4_pfamImport  72 LAAF------------TNs-----DE---DGgle--------------gaCYYSRICVRKEDadQ-Y------------- 103
Q5UW70       198 FSLQ------------ISk-----AG---DF-------------------GYRLWLATQADN--DdI------------- 223 Haloarcula mari...
CAL60853     110 FATV------------ARktsdrsTG---DT-------------------FYHSILIVRNDS--T-Y------------- 139
Q73N00       102 VVTN------------SGp-----SGtleDA-------------------LYYSFIAVRTED--A-A------------- 129 Treponema denti...
Q8CUY1       110 MVVP------------TGp-----SGtleDA-------------------MYHSWLAVNVDDqtN-Y------------- 139 Oceanobacillus ...
WP_015883163 120 ILQS------------VR------FG---SS-------------------TYHTQWFTNDPG--T-Ycldeaitvpddeg 156 Beutenbergia ca...
Q9K8N2       122 ILKS------------VR------NG---SG-------------------TYRAQYTVLADS--D-I------------- 145 Bacillus halodu...
WP_012199476 122 TATRdglnkdfdnakdWn------DG---KAteast----------nqavSYRALMIAGPSE--K-G------------- 166 Lachnoclostridi...
Q9CIQ7       121 LLMA------------TRkgl-snDG---SDsakywnehkpttktdkevtSYSSLIIAGNSP--M-G------------- 168 Lactococcus lac...
3N5L_A       105 ------------------D-----SL------------EDxlanA-----KSLTFGNGDPNSTSGYLVPGYYvF-AK--- 140 Pseudomonas aer...
4_pfamImport 104 ------------------KsgsgySI------------EN----I-----KGKSFSFVSATSTSGFKVPSSG-IvSE--- 140
Q5UW70       224 ------------------S-----SL------------AD----L-----EGKRVAHAEPSSNSGNLAPRA--LfSN--- 254 Haloarcula mari...
CAL60853     140 ------------------Q-----TI------------ES----L-----RGKKVALVDPDSTSGALIPRHV-FsKK--- 171
Q73N00       130 ------------------Qyk-deDG------------YD----Lnr--lKGKNISFVSTSSTSGFVIPATL-FvKK--- 168 Treponema denti...
Q8CUY1       140 ------------------K-----NG------------DD----FsldtiEGKRFSFVSNSSTSGFVVPSST-ImENfsd 179 Oceanobacillus ...
WP_015883163 157 seyafcngaeasegptgeD-----AL------------AL----Vp----EGAPISFVDAASASGYYYPATQ-LgEV--- 207 Beutenbergia ca...
Q9K8N2       146 ------------------E-----SI------------ED----L-----EGKVWVYSDLASTSGYLFPAAQ-LvTE--- 177 Bacillus halodu...
WP_012199476 167 ------------------Q-----ALaakvnageeltwED----L-----DAVNWSVMSSSSPAGYIYPSLW-LqDK--- 210 Lachnoclostridi...
Q9CIQ7       169 ------------------K-----KLakeand-gtltwKD----L-----NDAKWGLESTSSAAGYMYPSQW-Lt-E--- 210 Lactococcus lac...
3N5L_A       141 NNVDPV-------KA-------FKRT-LNSSHEVNALAVANKQVDVAT-----------------FNTEGXERLE----- 183 Pseudomonas aer...
4_pfamImport 141 FGLDSSdelleggKF-------FSEVlFGNSHVGSLVNLLSGDADAAA-----------------FDDVDVDMYLdlvsg 196
Q5UW70       255 QGVTPG-------ED-------YEVS-YSGGHEQSILGVANDDYDAAP-----------------VCSTCVTRVA----- 297 Haloarcula mari...
CAL60853     172 TGLPLE-------KY-------FSQVvYSGAHDQSLLNLSKNRVDAAF-----------------ISSTSLTIPV----- 215
Q73N00       169 FGLTGT-------DEliqgnsvFSKVlFAGSHQGSQVNLFRKDAEAAAfaipqtigvydliegeaYQTGAAYKV------ 235 Treponema denti...
Q8CUY1       180 KELTEE-------DLmeg-gplFEQVlFGGSHQGSAVNLLNGNADVAA-----------------FCDTCVENYVevaeg 234 Oceanobacillus ...
WP_015883163 208 QGIDPV-------ND-------INTV-FAGGHPNSVQNVARGDAPVGV-----------------SFNDARTDLI----- 250 Beutenbergia ca...
Q9K8N2       178 YDVPADgi----dSF-------FGNQiQAGSHDNALITVLEGGADVAT-----------------TFEDAREIIE----- 224 Bacillus halodu...
WP_012199476 211 YGKGIT-------DL-------SHAV-QSDSYGSAMARLAAGQVDVLL-----------------TYADARRDYA----- 253 Lachnoclostridi...
Q9CIQ7       211 NFKHSI-------RD-------LKNTvTMDSYDSAMAQLASGQIDVMP-----------------EYADARMDDAakwt- 258 Lactococcus lac...
3N5L_A       184 --------------LTQPEKA-------RQLKVIWKSPLIpGDPLVWR-NN---LSDEQKNKLRDFFFKYGan------- 231 Pseudomonas aer...
4_pfamImport 197 eansigavykakddAEAPVDSvr----gKEFTIIAITPVL-NSPICFNeEA---ISDDDRTKIIDYFCSDKvandkaifi 268
Q5UW70       298 --------------EADNIDP-------TNLKVVWASNPFpTTSFCYR-YN---LKPELQEGIRAAFIDYDy-------- 344 Haloarcula mari...
CAL60853     216 --------------ESGQIKR-------DEFRTLWTSKPIpRNPFVLR-NQ---LCSDLKRKIIAVFLERGgn------- 263
Q73N00       236 --------------VEGAIEPfdk-fpgSEITIIQSIPVLnAPIVMNT-KT---LSPEEQNKIQEALTSEKtannpgi-- 294 Treponema denti...
Q8CUY1       235 eentvgsvykvkdnAEE---Pfnt-vtgSEFTLMNVTPVL-NAPFVAN-TNl--LSDEEFETIQNLFSSEEianneai-f 305 Oceanobacillus ...
WP_015883163 251 --------------EEDPEIG-------TAVTVFASSPEIpNDGVAVS-GE---LSEEAQQQIADAFLAIAet------- 298 Beutenbergia ca...
Q9K8N2       225 --------------GDYPEAM-------EDLRVIGYTEEIpNDTISVL-NT---LPQELIDQIRDVFLSFNed------- 272 Bacillus halodu...
WP_012199476 254 --------------EKWSSEYnraasiwEETNVIGVTAPIfNDTVSVS-KNsakMDDAFKKAIQNAFINIGnt------- 311 Lachnoclostridi...
Q9CIQ7       259 ----------ttfgAK-ESIW-------DDTNVIGVTPAIaNDGIMVS-EKskiMTADFKKALSAAIKDMAkt------- 312 Lactococcus lac...
3N5L_A       232 ----aeQKKVLADL--QWSKFQASD-DDQL 254 Pseudomonas aeruginosa PAO1
4_pfamImport 269 dpedesAKGLFEKDs-EKTCFVKTD-DAWY 296
Q5UW70       345 -----sDTKIAEVFg-GRGTWTEIDyATTY 368 Haloarcula marismortui
CAL60853     264 -----aNKNVMQSL--NVMRFVPIS-DQDY 285
Q73N00       295 fkikdsYKKGMYPKytEKTKLVKTT-DAWY 323 Treponema denticola
Q8CUY1       306 vpedsdESGLFFKS--GDERFVPVE-DQWF 332 Oceanobacillus iheyensis
WP_015883163 299 ----deGLAVLDAVy-SIEGLVPAD-LEAL 322 Beutenbergia cavernae
Q9K8N2       273 ----edMIKILNDVy-RWDAIEEAS-DDEY 296 Bacillus halodurans
WP_012199476 312 ----eeGKKVIAIY--SHMGYQPAK-DSDY 334 Lachnoclostridium phytofermentans
Q9CIQ7       313 ----deGKKVIAIY--SHDGYVDST-KADY 335 Lactococcus lactis subsp. lactis
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