Conserved Protein Domain Family
DUF3854

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pfam12965: DUF3854 
Domain of unknown function (DUF3854)
A family of uncharacterised proteins found by clustering human gut metagenomic sequences. This domain is likely to be related to the Toprim domain.
Statistics
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PSSM-Id: 493041
Aligned: 53 rows
Threshold Bit Score: 123.476
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015146261    213 FWDWLIENPQISIVITEGMKKACALLS---IGQAAIALSGITMGRvkHNqDTEGNENQKEQvALQPYLNAFAADSRPIYF 289  Pseudanabae...
WP_012599411    178 FWEWFKNS-SAPLWITEGEKKAGCLLS---KGRVTTSVPGINNYH------DVKLKQEKNIlKLHPYLEHFA-DGRDIII 246  Gloeothece ...
WP_012597290    172 FWQWFQENKVIPLLLTEGGKKSLSALS---SDIVAIALYGCLCGV--------DSETGAVKeSLRPYIE-----GRRVYI 235  Rippkaea or...
WP_009547941    163 FWKWVKENPEVAIAVVEGTKKAGALLS---QGIAAVSIPGIWNGSp----KDSEGNP-----VLLPQLQYFTQPGREVVI 230  Crocosphaer...
WP_015211445    292 FWQYVRDK-GLTIVITEGSKKAAALLS---HGILAIAVSGVWLWG--VSeKDGNGKVINRE--LIPALQYFVDVPREWVV 363  Cylindrospe...
jgi:Npun_BF185  178 FWEWVKQHPEIPVILCEGEKKAACLLS---LGFVAIALPGIWNG---RVgKQDFDER------LHPDLMPLAQPGRKFII 245 
Q8YLA5          179 FWAWVLAHPEITITLTEGEKKAACLLS---LGFAAIALPGIWNG---RVgKEDFE-------RLHPDLVPMAQPGRRFII 245  Nostoc sp. ...
WP_015146345    152 FWAWVRQH-NLPIIICEGMKKACALLS---QGYIAIALRGITMGR---------GRNEQNNvTLQSYLQLFATSDRTVLF 218  Synechococc...
Q7NEJ1          148 FWPWVLAS-RLPIVITEGAKKAAALLS---IGLPAVALPGIWGGC--RKgDRNVAA------SLREDTARLADAGCPILF 215  Gloeobacter...
CAK27599         80 mpngyLENVSIPLVFIEGPVKVDACYQhipTGYCFIGLTGTWNTKdrRDeNG--NWDANNKtSTIPELKAIPMRGRQVII 157 
WP_015146261    290 CFDAETKLKTAQAVYTATIRTGNLFTEAGCNVRVVRLPllPgTDKTGVDDFLVAQGAE 347  Pseudanabaena sp. PCC 7367
WP_012599411    247 TFDRDEKPKTRVAVRKAIKKLGKLFKDKGCNVKICIWD--G-KKGKGIDDFLANgntl 301  Gloeothece citriformis
WP_012597290    236 AFDQDKKPKTRQTVAKATQKLALAITKASGEPYQVLW---NtEDGKGVDDVIKNQGGD 290  Rippkaea orientalis
WP_009547941    231 VFDQDEKLKTQASVIAARERLASCFRDQCCKVLFLSWE----TLEKGIDDAIVSNGKE 284  Crocosphaera subtropica
WP_015211445    364 CFDSDAKHKTVVGVSKALNSLGFAIKKQKSTVSVMSWN--G-AIGKGIDDVIFNAGKD 418  Cylindrospermum stagnale
jgi:Npun_BF185  246 LFDYETKAKTRWSVYQATVRTAKAIESAGCECEVALL---P-GTEKGVDDFVVARGED 299 
Q8YLA5          246 LFDYETKPKTQLQVFQATRRTAHVIQDAGCECSIALL---P-GPEKGIDDWVVALGKK 299  Nostoc sp. PCC 7120
WP_015146345    219 CFDTETKPKTKKAVYLAQVRTGKLFEAAGCSVKIIQLPllPnTDKTGVDDFIVAFGAD 276  Synechococcus sp. PCC 7502
Q7NEJ1          216 CFDNDVKERTIQDVKNAIRKTSALIVERGGRAGKLGF---P-GPHKGIDDYLAADVth 269  Gloeobacter violaceus
CAK27599        158 LFDSDIEDNI--SVDEAAADIANWTRKRGARPHRCTLPsePdGSKNGADDFLVRHGFD 213 
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