Conserved Protein Domain Family
DUF3850

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pfam12961: DUF3850 
Domain of unknown function (DUF3850)
The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.
Statistics
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PSSM-Id: 493038
Aligned: 17 rows
Threshold Bit Score: 101.969
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCY66815       3 THHIKLKEQFCDAVLSGEKPFEIRR-NDRCYQKGDHIRFVPIKnfsvegfsstiPFDHPIKDKEYRITYIfsgW----II 77 
WP_022288541 129 THTLKLEECFCEAVVTGKKCFEIRK-NDRGFQPGDTIEFIPVSng--------hPAIHVISNRRYRITYVlsgW----GL 195 Ruminococcus sp...
CDA13152       2 IHALKTKPEYFGSVRNGEKTFEVRK-KDRPFEIGDYAALNEIDe---------sGTYYTGRALLMRITYVladEe---fC 68 
1_pfamImport   1 CHDLKILPQFFQAVVDGRKTFELRReDDRMFHIGDTLTLCEWRp----------GSGHTGRQCKVAVVYIlrhAdfadGI 70 
CDC57412     328 QHELKIVASDYEDVISGKKSFELRK-NDRGYKQGDSLKMLEFK-----------DGKHTGRTIDADIIYMledYt---GL 392
Q8CWZ2         3 THKIKLSHCFFDDVASGRKNFELRK-NDRHYQVGDCLCLCEVK-----------EKRLTGRKLMVAVTYKlqdFt---GL 67  Streptococcus m...
CDA90581       3 AIRKKILPIYFDAVESRQKNFEIRK-DDDDVQVGDKLVLGEWKe----------NYGYTGRFATRKVKFVlrnVpe-yGL 70 
WP_052346721  19 THELKVWPACFAAVETGAKPFDVRE-NDRHFSVGDVLLMREYEp---------eSEQYSGRTTTRWISYIlngGa--fGV 86  Hymenobacter sw...
AGN26373      13 IHKLKILLQDFEQAITGIKNFEQIN-DNGDYQVNDLLVLKEWDp---------dTEGFTGREAARRIRHVp-kNv--pCL 79 
WP_020449488   2 IHELKIMPDYFEAVVIGAKTFELIN-DDRGFQIRDILILKEWDp---------dAEEFTGREVVRRICYVl-kRv--pGL 68  Candidatus Meth...
CCY66815      78 PRDYVVLGI 86 
WP_022288541 196 KNGYVAFGI 204 Ruminococcus sp. CAG:57
CDA13152      69 KPGYVVLGL 77 
1_pfamImport  71 PEGYAVLSI 79 
CDC57412     393 TEGYCILGI 401
Q8CWZ2        68 SDGYCILGI 76  Streptococcus mutans
CDA90581      71 KEGYCIIGW 79 
WP_052346721  87 AAGWCILGF 95  Hymenobacter swuensis
AGN26373      80 NSEYAILDI 88 
WP_020449488  69 TSGYAILGI 77  Candidatus Methanomassiliicoccus intestinalis
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