Conserved Protein Domain Family
M_domain

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pfam12938: M_domain 
M domain of GW182
Statistics
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PSSM-Id: 493022
Aligned: 10 rows
Threshold Bit Score: 123.109
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_049536808 1015 ASGGVSG---RFAAAAaGIGPMAFQNN-----------QNNLGGGVFSGGNGPAagSSGSFNS------MKFGGN----G 1070
1_pfamImport    1 DSGPFAGgppRIPPLNhAGGGLSFSQNnqamlnniaigPGASLGSLDGAAGGPA--NLAALNS------FKYLSQgsaaG 72  
EDS34444      710 FEPPFSGg--RFP-GGgNGPSLPFPQNpngpn--nnnmPGGMGGG--GGGGGNP--NLAGLNSlskanlQSYLNQ----A 776 
XP_069050698 1221 KDGSLVEdapTSPFL--PSPSLKLPLS-----------SSALPNQALGGVSTGL--AMQNLNS------NRQMQS----- 1274
XP_002072610  669 GAGGFATg--RYPVGGgAQPSMSFPPNnl-------mnAGGAGSSGVGGGGNNP--NVSALQV------QKYLSS----- 726 
EDX15213      553 SSGGFAG---RYPVNS-GQPSMSFPHNnlm------nnMGGTAGS--GGGNNNA--NMTALQV------QKYLNQ----G 608 
XP_002011428  671 NSGGFPQ---RYP----AQPSMSFPPNnlm------tnMSGTAVT----GGNNP--NMAALQV------QKYLNQ----G 721 
EDV90969      656 NSGGFPQ---RYPVSG-AQPSMSFPPNnlm------snMSGTAVT----GSNNP--NMATLQV------QKYLSQ----G 709 
NP_061869    1020 KDGGLVEeptPSPFL--PSPSLKLPLS-----------HSALPSQALGGIASGL--GMQNLNS------SRQIPS----- 1073 human
XP_009297874 1034 KDAGLADdaqTSPFM--PSPSLKLPMG-----------SAALPGQSLG-----V--AMQNLNN-------RQMQS----- 1081 zebrafish
XP_049536808 1071 ggGGVGGPGgNGPPGAFGqplGGgggnvagGLNQPN-----------------AQSQQISNHQLRVLVQQIQLAVQNGYL 1133
1_pfamImport   73 glTGHHPSFnQVGVVGIG---GR-------GQQQQHhhhhqhqq--qqqqlaaAAAAQPSNQQLRMLVQQIQLAVQSGFL 140 
EDS34444      777 ppSGPGGPFnQGGPNGMG---GAggagsggGLGGQN------------------SSAQPSTQQLRMLVQQIQMAVQAGYL 835 
XP_069050698 1275 ---------------GVF---SSsgaaqtrAIQQPQpplqqpsvpplsssqpsLRAQVPQFLSPQVQAQLLQFAAKNIGL 1336
XP_002072610  727 ----------QQGPHGVA---SSsasavsvGFGQGSgnaaqtv----niaaanTNNQQPSGQQIRMLGQQIQLAIHSGFI 789 
EDX15213      609 ---QHGVAV---GPQAVG---NSsavsvgfGQNTSNaavagaa----svniaaNTNNQPSGQQIRMLGQQIQLAIHSGFI 675 
XP_002011428  722 ggPPHGVAL---GPQSVN---ASnasvvgfCQNPPNsapav--------nmasNANNQPSGQHIRMLGQQIQLAIHSGFI 787 
EDV90969      710 --GPHSVAIgGGGPQSVN---ANapv--afCQNASNaapav--------niasNANNQPSGQHIRMLGQQIQLAIHSGFI 774 
NP_061869    1074 ------------GNLGMF---GNsgaaqarTMQQPPqppvqpl----nssqpsLRAQVPQFLSPQVQAQLLQFAAKNIGL 1134 human
XP_009297874 1082 ---------------GVF---GSsgaaqarALQQQPppqpsvpp--lnssqpsLRAQVPQFLSPQVQAQLLQFAAKNIGL 1141 zebrafish
XP_049536808 1134 DHQILNQPLAPQTLMLLNQLLN---HIKQLHLMQNNL-ARTG-GGGVNAVQMSLA--INKLKSQITSLQSQIATQQSIYL 1206
1_pfamImport  141 NHQILNQPLAPQTLILLNQLLN---HIKQMQMTQSNL-ARSGtTGGVSAVQLTLA--INKHKSQIAQLQQQIAAQQSIYL 214 
EDS34444      836 NHQILNQPLAPQTLFLLNQLLN---NIKQLQVTQNSL-QRGGaGGNA---QMSM---IPKIKQQIAGLQNQIATQQAIYV 905 
XP_069050698 1337 NPALLTSPMNPQHMTLLNQLYQlqlAYQRLQIQQQMLqAQRNvSGPIRQQEQQVArtINNMQQQIQQHQRQLA--QALLM 1414
XP_002072610  790 SNQILNQPLTQTTLNLLNQLLI---NIKNLQAAQSSL-SR---GGNANPMAVNVA--IAKYKQQIQTLQNQINAQQAVYI 860 
EDX15213      676 SSQILTQPLTQTTLNLLNQLLS---NIKHLQAAQQSL-AR---GGNANPMAVNVA--ISKYKLQIQNLQNQINAQQAVYV 746 
XP_002011428  788 SSQILTQPLTQTTLNLLNQLLS---SIKHLQAAQQSL-SR---GGNTNQMVANLA--IAKYKQQIQNLQNQINAQQAVYI 858 
EDV90969      775 SSQILTQPLTQNTLNLLNQLLS---TIKHLQAAQQSL-SR---GSNASPMVVNVT--IAKYKQQIQNLQNQINAQQAAYI 845 
NP_061869    1135 NPALLTSPINPQHMTMLNQLYQlqlAYQRLQIQQQMLqAQRNvSGSMRQQEQQVArtITNLQQQIQQHQRQLA--QALLV 1212 human
XP_009297874 1142 NPALLTSPINPQHMTLLNQLYQlqlAYQRLQIQQQMLqAQRSvSGPIRQQEQQVArtINNMQQQIQQHQRQLA--QALLM 1219 zebrafish
XP_049536808 1207 KQHQQQQPHQ--QQQQqp-ghPGavnnvnvaalaAATGGHP----GN-DLFRSANDMSGLPS 1260
1_pfamImport  215 KQQQQQQQQQ--QQQQgqqgqPGpipppsllptvAGGGGPP----GGmDFLRQQHDLMALQS 270 
EDS34444      906 KQQQQQQQQQ--SGGS------------------SNVGGHL----GG-NFHREQNDLTTLQN 942 
XP_069050698 1415 KQQQQ----------------PP-----------PHPGLHPgagkSAlDSFPPHPQAPGLAd 1449
XP_002072610  861 KQQQQQQNLQpnSQQQ-----QP-----------PHPSAHLns-sGN-DYLRGHDAIANLPG 904 
EDX15213      747 KQQNMQPTSQ--QQQPqq---------------qQLFSVHLsn-sGN-DYLRGHDAINNLQG 789 
XP_002011428  859 KQQNLQQNSQ--QQHQ---------------------SGHLnn-sGN-DYLRNHDAIATLQG 895 
EDV90969      846 KQPNLQQNSQ--QQQQlp------------------sGGHMnn-sGN-DYLRNHDAIGTLQG 885 
NP_061869    1213 KQPPPPP--------------PP-----------PHLSLHPsagkSAmDSFPSHPQTPGLPD 1249 human
XP_009297874 1220 KQQQQQP--------------PP-----------SHPGLHPnagkSAlDTFPSHPQASSLSv 1256 zebrafish
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