Conserved Protein Domain Family
Sec16

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pfam12932: Sec16 
Vesicle coat trafficking protein Sec16 mid-region
Sec16 is a multi-domain vesicle coat protein. This central region is the functional part of the molecules and thus is vital for the family's role in mediating the movement of protein-cargo between the organelles of the secretory pathway.
Statistics
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PSSM-Id: 493017
Aligned: 87 rows
Threshold Bit Score: 58.7698
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_011389100  1075 IPIASFGIGGKLVSYFPtsrastgaeg-adgaggssnvYGSYSYN------------------------TSSYP------ 1123
XP_010661318   538 HPLVTFGFGGKLLVM-----------------------KDNGSFLtnss-----------------yghQDSAG------ 571 
Q9FGK8         514 HALVNFGFGGKLILM-----------------------KDDSGSLqnss-----------------fgsQKGTG------ 547  thale cress
10_pfamImport    1 HALVSFGFGGKLIVM-----------------------KDHSSFGnss------------------fgsQNPVG------ 33  
XP_006852622   615 HALVTFGFGGKLVIM-----------------------KSPSSSFg----------------------sQDPVG------ 643 
19_pfamImport    1 HALVTFAFGGKLVVM-----------------------KPNNSFSssaa-----------------igsQDPAG------ 34  
XP_002953837  2245 HVVFAFGFGGRAVLMRPpasgtdtgtmavfggpgplqlLPLAALTqthlaggnpr----qppsqqqpssTSGSS------ 2314
2_pfamImport     1 --VASFGFGGKLVTMHP---------------------RRKIRLAp----------------------aPGVVPspddgp 35  
6_pfamImport     1 --LASFGFGGNVVTMFP---------------------KRKLRLNiagssyrnsprg-apvpsefensnGELRK------ 50  
XP_002908536  1698 scLASFGFGGNVVTMFP---------------------KRKLRLNiagssfrnsprgpatpsafdnggkGELRK------ 1750
XP_011389100  1124 ----T-QLKIQS------------------LSSLVSSTAYASAfdp-----------ltFPGPVyegpsgtnalsratga 1169
XP_010661318   572 ----G-VVNVLN------------------LMDVVVGKNDSLCtgtggrdyfhilshqsFPGPLv--------------- 613 
Q9FGK8         548 ----GsSISVLN------------------LAEVISGSASYSSlgenslsyfscldqqsLPGPLv--------------- 590  thale cress
10_pfamImport   34 ----G-SISVLS------------------LMDVVSERFDNSSlvvgacdytralcqqsFPGPLv--------------- 75  
XP_006852622   644 ----G-SISIHD------------------LLDVVLDKTDVANggngacdyfnalcqqsFPGPLv--------------- 685 
19_pfamImport   35 ----G-SISIIN------------------LMDIVVDKNDIMKdgsgassyfhalcqqsFPGPLv--------------- 76  
XP_002953837  2315 ----GgPTKADKriprggqaaastpvleplLRQLAA-----------------------FPGPL---------------- 2351
2_pfamImport    36 alrkG-PVNVWS------------------LKDVASPETVVCDaa-------------aFPGPA---------------- 67  
6_pfamImport    51 ----G-PVNVYR------------------MDQLHPKDKEFEQmd-------------iFPGPL---------------- 78  
XP_002908536  1751 ----G-PVNLYR------------------MDQLHPKNKEFEQmd-------------mFPGPL---------------- 1778
XP_011389100  1170 asASKTKKAA-VLKHLEERIQELSAGVGYlrrrpsfsasstgsnrgtqaaqdQDGELE---ARRTEDKVLLLRLLRLLVE 1245
XP_010661318   614 --GGNVGSRE-LNKWVDEKIAKCESSNMD--------------------------------YRKGEVLRLLFSLLKIACQ 658 
Q9FGK8         591 --GGNVGSKD-LHKWLDERILNCESSYMD--------------------------------FSRGKLLKMLLSLLRISCQ 635  thale cress
10_pfamImport   76 --GGSPSIKE-LNKWIDERIANSESPDSD--------------------------------YRKGEVLRLLLSLLKIACQ 120 
XP_006852622   686 --GGSVANKD-LYKWIDERIANCETSSTY--------------------------------FRKGELLRMLVSLLKICCQ 730 
19_pfamImport   77 --GGSASSRD-VYKLIDERIANCAVSSAD--------------------------------FREGGHLRLLLSLLKICCQ 121 
XP_002953837  2352 ---GPATSKDkVLKWLSDHAAACGADDAPweqqt--------------nagdAGGPTAaaaAATAAQRQLLWEVLQLMVK 2414
2_pfamImport    68 ----SSAPVDkLREYVEKRATAAAAEVDEa-------------------------------GAEAEGKRLLWSVAGLALE 112 
6_pfamImport    79 --TEDVSDEA-ILEYLDERLKRSETSMTAd-------------------------------EAENEDELLLLGVLRVLVK 124 
XP_002908536  1779 --TENVSDEA-ILEYLNDRLKRSEAPTSIa-------------------------------EAEDENDRLLLGILRVMVK 1824
XP_011389100  1246 NDG 1248
XP_010661318   659 YYG 661 
Q9FGK8         636 YYG 638  thale cress
10_pfamImport  121 YYG 123 
XP_006852622   731 YYG 733 
19_pfamImport  122 HYG 124 
XP_002953837  2415 HSe 2417
2_pfamImport   113 FK- 114 
6_pfamImport   125 CNG 127 
XP_002908536  1825 CNG 1827
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