Conserved Protein Domain Family
Cnd1_N

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pfam12922: Cnd1_N (This model is not part of the current CDD release)
non-SMC mitotic condensation complex subunit 1, N-term
The three non-SMC (structural maintenance of chromosomes) subunits of the mitotic condensation complex are Cnd1-3. The whole complex is essential for viability and the condensing of chromosomes in mitosis. This is the conserved N-terminus of the subunit 1.
Statistics
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PSSM-Id: 520526
Aligned: 116 rows
Threshold Bit Score: 96.5014
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_004361359    77 KDIRNIVLKIIQGGLQGLSIAIQKVISitpqqqtDDhdrYNNQLLQVRSALKIYVYFLHILVKTQLERSPPEAADGAQSs 156 
12_pfamImport    1 LGVKEDTLELLVKVVSDLAVSLPTALTs------TTf--SAAERKEKLNAVKMSVFLLCKLTESLESVSYRQSIITA--- 69  
XP_069038810    73 SAVKADTLDILLKVVSGLSASLPALLD-------SSs-lSPADRKLQLNTVKMGVFLLCKLAEGLESDSSRHSIITAPSk 144 
8_pfamImport     1 TAVKEDALELMMHVVSHHSNDLPAILS-------DSg-lSHADRAAHLNALKMNCYLLTGLMDAFEMETCNNSCLEAD-- 70  
XP_027305536    74 PALREDALELMMQVASRHSNELPAILG-------DSg-lSHADLSAHLSALKMNCYVLTGLLEAFEKQTSKNGLVEVDP- 144 
XP_008117482    79 SVVKEDALELMMKVVMSHSTALASILSs------ADl--VSSLRALHLNALKMNSYVLVRLGEAFEMESGKNNLVGLNS- 149 
EDO34797        71 SSVREEAWQVLLNALSQLSSNIQPIIEq------GDa--DTETRKTHLNTLKMICYLLTQMSESFEAEATKPTSQVTG-- 140 
Q15021          75 PGLKEDTLQFLIKVVSRHSQELPAILD-------DTt-lSGSDRNAHLNALKMNCYALIRLLESFETMASQTNLVDLDL- 145  human
XP_056655232    75 PDLKEDVLEFLMKVVSRHSQDLPAVLDd------TTl--SVSDRSAHLNALKMNCYSLIRLVESFESTTSKTSLMGQDH- 145  gray short-t...
XP_005171438    72 VAVKEDILELLIQVVRGLSVSLPTLLM-------AGt-lSAVDRKQQLNAVKMSVFLLCKLTEMLESDSNRETIVTAPS- 142  zebrafish
XP_004361359   157 sqtpakQGAKRKkkGSSAAEEELWDSDQNRERLIQYLYEAFEKDLTRLWPMTRPDEEMLSLVQRVLFSMLEKQEN--IKT 234 
12_pfamImport   70 ------PGKGSK---KGKGGEGLLQWDSERERVLHVLVQLLQLDIRSLWSLSLVEEEFISCVTCCCYKLLENPTIshVKN 140 
XP_069038810   145 ------GGKKSR----TANADAPFQWDTERDHVLQALTQLLQLDIRTLWSLSLVEEEFTSCVTRCCYKLLENPAInqVKY 214 
8_pfamImport    71 ------PGRKSRk-NHAKTSGSLW--EEEREPLLQLLTRLLQLDLRQLWGGLAVEEEFVSLMTGSCYRILENPSIglQKY 141 
XP_027305536   145 ------GGKNKK--NRAKGSESSW--EEEREPLLRLLNQLLQLDLRRLWGGVVEED-FVNLVTGVCYRILENPTIghQKY 213 
XP_008117482   150 ------KIKGKK----NNAKAFLW--EEERQSVLQLFTQLLQLDLHHLWSGLVVEEEYVSLVTGCCYRILENPSIghQKH 217 
EDO34797       141 ------KGRGKSa-ASKKKNSAGFDWEQQRERLVEMLGHLMQLDVNRLWDPPVVEEEFVNLMTGCCYKLLENPAV--IRN 211 
Q15021         146 ------GGKGKK---ARTKAAHGFDWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSLVTGCCYRLLENPTInhQKN 216  human
XP_056655232   146 ------GGKGKK----SRTKAQGFDWEEARQPVLQLLTQLLQLDICRLWNHSVVEEEFVSLLTGCCYRLLENPSIshQKN 215  gray short-t...
XP_005171438   143 ------KGRKKD--KAAGKDLLQW--DSERDTVLQCLTQLLQLDIRTLWSLSLVEEEFVSCVTCCCYKLLENPTIshMKN 212  zebrafish
XP_004361359   235 ASIRISIYSFIVLLVKNYEFHMTT 258 
12_pfamImport  141 KPTRDCIIHLLGILITKYNHLLGA 164 
XP_069038810   215 KSTREAIIHLLGLLVKKYNHLLGA 238 
8_pfamImport   142 RVTREALTHLLAAALVHRDHMFSA 165 
XP_027305536   214 RATRDAVTHLLATALTHYDHLFSA 237 
XP_008117482   218 QPTREAIIHLLGVALRRYNHMLSA 241 
EDO34797       212 KTTKDVVINLLGIVVKKYNNGLGA 235 
Q15021         217 RPTREAITHLLGVALTRYNHMLSA 240  human
XP_056655232   216 RPTREAITHLLGVALTRYNHMLSA 239  gray short-tailed opossum
XP_005171438   213 KSTRDAIIHVLGIMVKKYNHMLGA 236  zebrafish
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