3M1U


Conserved Protein Domain Family
SH3_6

?
pfam12913: SH3_6 (492999 is an unknown moldel)
SH3 domain (SH3b1 type)
This domain appears to be an SH3 domain of the SH3b1-type, and is just C-terminal to an N-terminal domain that is probably the stabilizing domain for the structure from Desulfovibrio vulgaris DVU_0896, Structure 3m1u, which is a four-domain protein. The next domain is an SH3b2 and the last, the C-terminal region, is the catalytic domain of the cysteine-peptidase type, ie family NLPC_P60, pfam00877 (details derived from TOPSAN).
Statistics
?
PSSM-Id: 492999
Aligned: 33 rows
Threshold Bit Score: 64.5824
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3M1U_B              134 PXFTAPTrAGQGYPFDXFQRTAVWXGTPVFVGHATADRAWLYVETAFAAGWXP 186 Nitratidesulfovibrio vulgaris str. ...
Q8ZNU1              179 PLFNDPRqAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRWQYVVSPAVTGWVH 231 Salmonella enterica subsp. enterica...
Q83EU4              189 vAFYDYHlAGQGYPFDNLQMSALWAGTPVYILCETQDRAWSLVVTPHYIAWVK 241 Coxiella burnetii
WP_014394667        168 rLFASE----DSRDYESLQAGILFPGEPVVIAHQSADQQWLFVQTTQGPAWVQ 216 Corallococcus coralloides
WP_013536212        168 RVFSSP----GDTDIDRFQESALFPGDAVAVLHESRDRQWLFVASERYSAWIE 216 Pseudoxanthomonas suwonensis
CBA14957            179 RVFSAP----DDHDIDRFQESALAPGSAVAILHVSHDGQWLFVLASNEAAWIA 227
Q8P4A4              137 RVFTTP----DDRDIDRFQESALYPGTPVAVLHTSADGVWRFVLAENYAAWVA 185 Xanthomonas campestris pv. campestris
WP_012158784        163 RLFSSP----EDYNIDRLMETAIYPVEPMVILSESKDGEWYFAQMYNYLAWIP 211 Alkaliphilus oremlandii
goetting:Cst_c08690 114 psFKKSFpDAASRRIDYFTETAVYAAEPVQIYHISADGHWYFARVYNYRGWIP 166
WP_012939006        145 rAFDSA----SDTQFDNWQETAVDPATPVRVYHTNPQGNFIFVRTPHYRGWVP 193 Acidaminococcus fermentans
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap