Conserved Protein Domain Family
PRP38_assoc

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pfam12871: PRP38_assoc (This model is not part of the current CDD release)
Pre-mRNA-splicing factor 38-associated hydrophilic C-term
This domain is a hydrophilic region found at the C-terminus of plant and metazoan pre-mRNA-splicing factor 38 proteins. The function is not known.
Statistics
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PSSM-Id: 520497
Aligned: 28 rows
Threshold Bit Score: 32.4395
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001415571 179 P-RVSALE----TDVKDLEEQLENAVEeAIGREMRMDVDGDD------DELDTTATRD-AAGKRPREEDEEGELANASTP 246
NP_001169167 175 PtKLSGAT----GDS---SRQGSEDTA-RRPPSVKASLSVSF------GQRAPHRAST-RDSSPVRRTVTRDGHRSSYSP 239
Q4D7M0       329 P-MMQRIE----AECKRREELRLTRRDeGSGGGIRAAANMTP------TNASRGNEET-KVRGSGGGVGVFGFRNMREL- 395 Trypanosoma cruzi
XP_011390900 178 P-RISKLEtsllKALQAGERTDSSDDE-HSDADEDGMLNLTR------CKLERLKQAT-HTWRKSSPQPGYAYDVEAEYT 248
XP_001748637 698 PySPQSFE----------EGYKEEEDEdAQPVRARDPRAEAN------VPLPIRSPSP-PPVRSGRDRDAAPDDRNLDRP 760
EDS40398     472 D-VVAVLN----NSTVSSTSELDNSAKeASFRSKDFDLSFGKystglyGSGSITSSTL-TAAATPATSSASKKKDSRRSR 545
Q0U5G5       227 P-RESPLG----DEV----DELDEDMKrEGSEGSVRSRTRSY------DSRSRSRSYDsRSRSRTRTRSRSYEDGER--- 288 Parastagonospor...
Q2H4I5       171 P-RVSPLGa--lEDLLEEDEAMENGDDaNGDGHESESGFVRS------RSRSQTRSRS-QTRSRSQTRSRSQTRSRSQT- 239 Chaetomium glob...
XP_001907172 234 P-RVSPL-----GSLEDLLEEEDEEMKdGGEDKNGRGGSGGE------RSRSRSYSSS-RSADRRDSRSRSRDRRDS--- 297
Q80SY5       236 T-RPRKIK----KDGKEGIEEIDRHVErRRSRSPR-------------RSLSPRRSPR-RSRSRSHHREGHGSSS----- 291 house mouse
XP_001415571 247 aakvnrrqpvdlHDEGNARHRsrspQRRggggdygeRRGGGvRG----LSRDRG 296
NP_001169167 240 sr---------rSGSREGPDH----DRSdre--ldhSSRDReRA----RDRSNR 274
Q4D7M0       396 ------------QAYVRERERvlvpQRIlsm---taAPKEGdGDgdyySDLDDD 434 Trypanosoma cruzi
XP_011390900 249 sq---------eDSDGEASTR----PRF--------ISPSPsVS----PDRQLQ 277
XP_001748637 761 y----------rDDGYRRSSR----DCDdg-----yRRSSRdRD----DGYRRS 791
EDS40398     546 sr---------sRSRDRRRDR----SRSkh-----kRRRSRsRS----KSRDRA 577
Q0U5G5       289 ------------RRTRSPSDR----GRRd------sTSRSRtRS----RSRRGE 316 Parastagonospora nodorum SN15
Q2H4I5       240 ------------RSRSQTRSR----SQTr------sRSDSRrRS----RSRSGS 267 Chaetomium globosum CBS 148.51
XP_001907172 298 ------------RSRSYSRSR----SRTr------sRSRSRsRS----RSRSRS 325
Q80SY5       292 ------------FDRELEREK----ERQrlereakeREKERrRS----RSIDRG 325 house mouse
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