Conserved Protein Domain Family
Cupin_6

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pfam12852: Cupin_6 (This model is not part of the current CDD release)
Cupin
This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.
Statistics
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PSSM-Id: 492955
Aligned: 68 rows
Threshold Bit Score: 60.408
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_003953317   3 DALSSLLHGVRPQGALFDQSAFVPPWSL--RFeertP-----------------LALLTMFTGTAWVIpdGA----EP-V 58  Streptomyces cl...
WP_012167485   6 DILSDVLNSLDICGSLLLHESYTAPWAI--SV----PgaqqlgkllrvqtgtraVAFHLVERGYIELTs-PQlg-vKP-M 76  Acaryochloris m...
WP_011828605  19 DLLSDLLGSMHLAGMVLFRAAFREPWAVltPG----Saqlarvl---pfrtehiIPFHVIATGSCRLAl-PGh---EP-V 86  Methylibium pet...
WP_012096837  24 DVLSDALRVVRASGALLLRGEFTGSWAVatPD----Ssaiariv---cpggarlAIMHLLAEGDCWIAl-PGr---ER-V 91  Anaeromyxobacte...
WP_011757809   3 NPLADALAKLRLEGAIFLRGSYSEAWAY--ES----Vpgadlaal-lvpgaervVLMHVIGRGRCWIQv-GDg---dR-H 70  unclassified No...
EEF26565      66 DAVSDVLRVVRLGGAVYLHAELTAPWCMi-GR----Adqslctay--lpksdrvVSYHLITEGTCWARl-PDc--sEPaI 135
WP_012406328   2 DAVSDVLRVVRLGGAVYLHAELTAPWSLigHA----Dqalctay---lprsdriVSYHLITEGSCWARl-PDstd--paI 71  Paraburkholderi...
WP_011765053   4 DTLSDLLRAVRLRGAVFYYVSNRAQWAA--EAp---Pardiaaav--mpgaehvMEFHLMARGCGWAAv-DGl---AP-V 71  Azoarcus olearius
WP_011985910  27 DPLSDVLQSVRLSGAVFFHIEGSSPWVA--EAp---Psravagif--mpraqhvIEYHAVTRGGCWGGivGE----RP-A 94  Anaeromyxobacte...
WP_015928273   4 DVLSDVLSAVRLTGSVFFDITAAAPWVA--EA----Ppsaqiaga-vlpgaqhaIEYHVLTRGSCWISi-VDgapfEP-V 74  Methylobacteriu...
WP_003953317  59 RLSPCDVAIVTGPEPYTVADSpgT------APlaVIdgdecrgpdgrpytdttgmcgPALgngIPSGIadgtGNGiadGT 132 Streptomyces cl...
WP_012167485  77 VVEAGEMVICFSGSPHQISQGteP------PSisVE---------------------YVLs--GGEIP----FRC---SA 120 Acaryochloris m...
WP_011828605  87 WLREGDAVLLPYGDSHRL-EGleEtapvqvGQllPC---------------------QPWkdmPQVEH----GGG----- 135 Methylibium pet...
WP_012096837  92 RLATGELVLFPRGDAHLL-GSgdHaavvpvSAllPP---------------------APWtelPVLRH----GGG----- 140 Anaeromyxobacte...
WP_011757809  71 WADAGDVVVLPYGDTHRMGGVesVe--------pVQ---------------------VGTl--VQPPP----WTR---MP 112 unclassified No...
EEF26565     136 CVGAGELLVVPQGEAHIMGSAldL------TPvpAG---------------------PLIe--SQLAA----MPG---EV 179
WP_012406328  72 RVSAGELLVVPQGEAHIMGSAv-------nIPpvPA---------------------GPLlesQLATM----PGEv--LN 117 Paraburkholderi...
WP_011765053  72 RLAPGDIVVLPHGDAHVMSSAp----------------------------------gIAPqriSAEWV----FATr--QV 111 Azoarcus olearius
WP_011985910  95 RLDAGDVIVFPQGDAHVLSSEpg--------------------------------lrAPPdlaTYASL----LDGp--PP 136 Anaeromyxobacte...
WP_015928273  75 QLQEGDIAIIPHGEPHAVSSApgM------Ra-kPD---------------------LDVh--RRPYE----VGG---LP 117 Methylobacteriu...
WP_003953317 133 GNgiasgagvangtgNGAGVangngdgygggacafpegpfgpgpadtagTTVLLKGVYQVEGSVSDRVLTALPRVALVp- 211 Streptomyces cl...
WP_012167485 121 D------------------Ars--------------------------sSLLCLCGIFYLRDTYLNPLFAALPPVLHApv 156 Acaryochloris m...
WP_011828605 136 ----------------GAV-------------------------------THIICGFLQCDELLFRPILRHLPTLLHVsp 168 Methylibium pet...
WP_012096837 141 ----------------GER-------------------------------ARIVCCYLRCDDLLFTPFLEPLPPVLHLra 173 Anaeromyxobacte...
WP_011757809 113 AIe------------HGGGGdp--------------------------tQ--VVCGYLASEDPLFDPRLSALPPVFVVsp 152 unclassified No...
EEF26565     180 LN-------------LSYGGgg--------------------------aRTSLLCGFLACDDALTNPVLGSLPRLFKVdv 220
WP_012406328 118 LS-------------HGGGGa----------------------------PTRILCGFLACDDALSNPVLGSLPRLFKVnv 156 Paraburkholderi...
WP_011765053 112 PKpmpvafhhgvhepGATGPvd-------------------------gaESVLVCGFLGCDLKPFNPLVAALPRLLHLpa 166 Azoarcus olearius
WP_011985910 137 VHi-----------pLGGGGa---------------------------dRAEILCGFLGCDARPFNPLLATLPRVLHArl 178 Anaeromyxobacte...
WP_015928273 118 IRlr----------aGTGGAgd--------------------------aH--VICGFFSCDVRPFNPLLEALPRFVRVgr 159 Methylobacteriu...
WP_003953317 212 -----sVPEGCPPLAMIAQELARDIPGRQVILDRLLDLLLVTSLREWFA 255 Streptomyces clavuligerus
WP_012167485 157 sq-vesFQNLTGVASLIAKELDKPSAGSSFMVERLLELLCAGAVRSYMA 204 Acaryochloris marina
WP_011828605 169 da-tpaDHWLGSTIRHTAAEASRTTPGSRSMLPRLTELMFVEILRKHMQ 216 Methylibium petroleiphilum
WP_012096837 174 dg-gstHEWVSASIRYVIAESTRGGPGSGALVGKLTELLFIEALRREMC 221 Anaeromyxobacter sp. Fw109-5
WP_011757809 153 v--geaQEFVRASIAYALQQTAQVADGRFEVPPRLPELLLVEVLRLHLA 199 unclassified Nocardioides
EEF26565     221 rs-dahSAWIEASLRYAATEAAQRRAGSAIVLSRLSELLFVWAVRRCID 268
WP_012406328 157 rn-dpqSAWIEASLRYAAEEAAQRRAGSAIVLSRLSELLFVWAVRRCID 204 Paraburkholderia phymatum
WP_011765053 167 a---raGEWVAHVIDQAARESTEQRPGADAVLERLAEMMFVDTARRYLD 212 Azoarcus olearius
WP_011985910 179 a--darGSALETFMEAALRETRERRPGGESVLARLSELMFVEVVRSYLA 225 Anaeromyxobacter sp. Fw109-5
WP_015928273 160 gaspatDGLLNQFVLLLSHETRHRRPGAQSVLNRLSELMLIEAVRTYMD 208 Methylobacterium nodulans
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