3U1D


Conserved Protein Domain Family
HTH_20

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pfam12840: HTH_20 (This model is not part of the current CDD release)
Helix-turn-helix domain
This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.
Statistics
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PSSM-Id: 520486
Aligned: 61 rows
Threshold Bit Score: 34.8181
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3U1D_A          26 VLHETRLDVLhQILAQPDGvLSVEELLYRNpD------ETEAN-LRYHV-DELVD-RGIVEKI 79  Halomicrobium mukohataei DSM 1...
Q0W2S9          41 LLASSRKDVT-RAL---QA-HLLEDIDEGL-DtgmvkrCDMREtCRNTFgEVLSRnAGLILLD 97  uncultured methanogenic archaeon
WP_008082206    23 FASKHRRDVF-RELTRAPC-QTSSAIAKTL-N------YDVQD-VEWHL-RKLIE-NGFIEKR 73  Candidatus Aciduliprofundum bo...
WP_012107107    59 ISHKTAGVVV-QLLSSEGP-LSLSDIANRL-E------ISMNA-AKYHI-VNLTK-AGVLEIS 109 Methanoregula boonei
jgi:Hbor_35430  30 LSSKTTRMIL-AEL-HRSP-STPTELADQT-E------TSIQN-AMYHL-EKLEE-TDLARVV 79 
7_pfamImport     1 LSSGTARRIL-ADL-HEDP-ANAAALADTV-D------TSLQN-VQYHL-GRLEE-AGAVEVV 50 
Q9HRQ6          36 LGSRTAREIL-SAL-YEEP-DTASSVADRV-D------TSLQN-ASYHI-ENLVE-ADLLEVA 85  Halobacterium salinarum
Q5V645          36 LASDTSRSLF-RTL-YDEP-GTPSEIADRC-D------TSVQN-VHYHI-SNLKD-AELIEPV 85  Haloarcula marismortui
Q8TQL1         107 FENSNRARIY-EYIKTRPG-AYLSEIIEKA-G------IDRGA-ARYHI-KILKAhHKIEAYR 158 Methanosarcina acetivorans
Q9RZ76          19 YSTMTRRALL-AVLAERSP-ATTLDIQRAFpA------LSNEQ-LSQDI-RPLLK-AGLVKSP 70  Deinococcus radiodurans
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