6WGE,6ZZ6,5ME3,6YUF


Conserved Protein Domain Family
Nipped-B_C

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pfam12830: Nipped-B_C (This model is not part of the current CDD release)
Sister chromatid cohesion C-terminus
This domain lies towards the C-terminus of nipped-B or sister chromatid cohesion proteins.
Statistics
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PSSM-Id: 520482
Aligned: 121 rows
Threshold Bit Score: 101.484
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6WGE_E       1113 SSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTD-PEPAMRNKADQQLVEIDKKYAGFI 1191 human
XP_001581890  901 AAPLISQFIKNITNCFKSQNKTVRTDSLKLVSIGLSNGLINAHEVLPFVIACLSS--TECYKSAIETIKKCQESSFEGAL 978 
XP_003056333 1245 ANGVAQRYWSDVIELSTDPEPSVRLKALHLVEIVLRQGLVHPMSCFPPLIALQID-PVVTVRKLAFRLLKQQRGKHPEFF 1323
XP_020428545 1552 LVSSIQKFFSTFCKLLVDSEQSVRFFTVSTVELIVKQGIINPLEAVPEIITLITD-TSPEISEVAYRVLEFINQKHSSTL 1630
Q54RK7       1685 LVSSVQKYFSSMIKFLLEPQESVRLATISTIELIIRQGILNPLDSVPYIIALITD-PNRFISELAFKTLNSLNQKHTSSL 1763 Dictyostelium...
Q4DSU4         34 ATWVLQKFHVQILQLCEISSVAVRQLAFEVLQLCAEGGLLPPSKYASALIVLAADpQNEVIRKAAVDCMASQTKRYADIV 113  Trypanosoma c...
Q385W6       1344 ATWLLQQFHEHVTLLCGSYMLPVRELAMEILHLCAAGGLLPPPRYTKALIVLGADpQSGDVRRTAVAYVLEQCERHGDLM 1423 Trypanosoma b...
XP_002185061 1313 FGGVLTNHADRLFEMSQSKDRRVRYAALDLIGLLLRQGLVNPNECIPFLFALQGDvENAAIRSLALHLLMKEGERRPDAL 1392
XP_002287148 1583 SGSVLTKHAVRLYELTTSKEEKVRNMICDLIGHLLRQGLINPMDTVPFLLALQGDvKSPSTRALALKLLVNEAEKRPDIM 1662
XP_002906797 1257 IGNVMQAELVHILALSLQRVPQIRKEAIACIGALLTPGLVNPLQCIPNLVTLETD-RVSDVRDAAFSLLLAL-EKYRSQF 1334
6WGE_E       1192 HMKAVAGMKMSYQVQQAi--nTclkdpvRGFRQd-------------------ESSSALCSHLYS-MI--RGNRQHRRAF 1247 human
XP_001581890  979 KTRISDGIDQSYEFIVA----F------SED-------------------------KSIRRLGFTdLFtlTKNPLLRKDI 1023
XP_003056333 1324 DHQLNLALELLFDYCKR----I------RSAVKsmakerqrnvdllvlrassaDDINTGFINLYK-LV--NTCRAARFKF 1390
XP_020428545 1631 FKRVIESIRLCYRFHLG----L------GTKSPy-------------------NSVSKGLSKFYL-LF--RNLKQSRTTF 1678
Q54RK7       1764 FKRVNESIKLTYKFHQD----L------NSKSPf-------------------NIVTKGMSKFYL-LF--KNSKSNRTIF 1811 Dictyostelium...
Q4DSU4        114 AANAATGVVKAFDLHDA----C------GVDVLrsavl----------sdtgpEAVECVHAHLFT-----SFRKRHRDAF 168  Trypanosoma c...
Q385W6       1424 VASSTAGIVKAFDLHAV----C------GVDVVksaigvyd----tqhhngqgEGEYCVHAYLFK-----SLHKKYRDAI 1484 Trypanosoma b...
XP_002185061 1393 RQRICVGAKQAYDFQRRiysqK------DAASAlitvr-----------rgrvQGTECIFGSVFRnCI--SKSQKQRRGL 1453
XP_002287148 1663 NQRIQAGIKRAFNFQRTvyseE------TDGAPrvtalien-----kvegvktATETIFDSVIIEsSL--RSKKAQRQGL 1729
XP_002906797 1335 HAPLLKGIQDSYLFQLR----V------YGDATalgi-------------denKKAYCLFGRLYMnCV--KSTKAQGTLF 1389
6WGE_E       1248 LISLLN-LF-------------DD-------------------TAKTDVTMLLYIADNLACFPYQTQEEPLFIMHHIDIT 1294 human
XP_001581890 1024 MTNLVSkVYaq-------------------------------mDVKSDMNKCLWLCDILVNLNYEYQWEAYYVCQLLQKT 1072
XP_003056333 1391 LHAVLL-RYek-------------------------------kVVNSEITYVCFLASATAALPFTMNDEVLFVIFHLNRI 1438
XP_020428545 1679 INHIMS-QFent----------------------------nktYRYKNLEYCRFLVEILASLPYSNMDEIFEIVVAIDKI 1729
Q54RK7       1812 LSTILT-NFesi-----------------------------keYRYKELSYFRFVFEILATLPYGNMDEVIVVINTIDKI 1861 Dictyostelium...
Q4DSU4        169 LSSLLR-YFyqegraaqwlrehRekd---------------geSARSPFPFLGHLAIVMAHVPYTQESDVLHVLDGCRTA 232  Trypanosoma c...
Q385W6       1485 VSSLMC-YFheearvgqwmrehKLtcsggaas----gskglmeLTPSPLPFLIHLTVVLAHIPFQLESDVVHLLDSCRTV 1559 Trypanosoma b...
XP_002185061 1454 FKNLLS-FFet---------aeVNvetpfaknvhllkisgggqANGSDLSLLSFTSQILAYLPYAAASDPLFIIHHIGSI 1523
XP_002287148 1730 YKSIIS-LF--------------Ekdvthettp-tnegkapnhGAADRVPLLAFASQILAHLPYNCASDPLFVVYHATSI 1793
XP_002906797 1390 LRALVN-QF--------------TdqgtvlqplknkpftshskTFTTSLKYLCYLAQILSTLPYEVEDEPLYIIYSINRY 1454
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