Conserved Protein Domain Family
CSS-motif

?
pfam12792: CSS-motif (This model is not part of the current CDD release)
CSS motif domain associated with EAL
This domain, with its characteristic highly conserved CSS sequence motif, is found N-terminal to the EAL (pfam00563) domain in many cyclic diguanylate phosphodiesterases, such as PdeB/C/D/G/N from E. coli K-12. It has two highly conserved cysteine residues with potential disulfide bond formation, which might control the enzymatic activity of the cytoplasmic C-terminal EAL domain.
Statistics
?
PSSM-Id: 520454
Aligned: 47 rows
Threshold Bit Score: 86.3846
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q1LPF0        38 ERAEIKDFANKAIMRAEVVTSQAFAALNDLDQ-QPGAPCSPPNLEHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRaK 116 Cupriavidus met...
4_pfamImport   1 TRNQLHSFAELALEKTELVVQQVELARDAIQQ-YQGKACTPAHQKRMQDIIRGRLYISELIYAQDDHFLCSTVMAPAS-- 77 
P32701        38 VNNQLRTFAQLALDKSELVIRQADLVSDAAER-YQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVN-- 114 Escherichia col...
WP_023788440  43 DSLRRDAIAELA--HLDTVQSNITNAFKELQAtVTASPCSRPFMQQLRRVAFLPDGLNKFMYAPGGTVTCSTSLSDIT-T 119 Hyphomicrobium ...
Q3ID42        41 LVAQTHSDSQYLLSQVDDGVEESVRVLTKLNN-LNFTTCNEANLLAMRRMLFDAKFAIDIGYFKNNTLICTTGAGMLE-N 118 Pseudoalteromon...
Q9I1R7        44 DGAHLRSYTERALERALEISSAADQMLREMNA-GSAPACSDRDLEMLRSIVLESRFMSDVGRISGDRVMCTGVRGRLR-A 121 Pseudomonas aer...
Q1H3Q9        42 DRQDLQSYSNDLFARAVAVAAETEK-ILDSDW-GTEAPCSEDDLDRMRYVIFYSRMLRDVGRLEVNRLLCSAGWGALP-D 118 Methylobacillus...
Q6D5E9        50 EQTQLLHYSEEVLDQGIAVANEGRETINRVLT-LNNTPCSSADLKELRLISFYSVYLRDIGRIKNNYLICSAGWGMLN-P 127 Pectobacterium ...
6_pfamImport   1 EQKRLVSYAQEVLAQGVAVAQESRDTMQRILL-LGNLPCSDADLRELRLLSFYALNLRDVGRIENDRLICSAGWGRLN-P 78 
Q31S15        37 EQNYMLATARGLLRSSEKAADQVDKGFKELRAlQSVQTCDPEQIQVMRKIDLASAYIQAIGYVSGNKLVCSSM-GKDS-- 113 Synechococcus e...
Q1LPF0       117 DLTLPPPD------YQNNEGYS------MWFRRK-SPLS-NERNDLQIGRNGRYVSIDRGSYVDLIDPaKRPIAAIQIPT 182 Cupriavidus met...
4_pfamImport  78 PYIIPAAD------YKREPDVS------IYYYRD-TPFF-AGYKMTYMQRGHYVAVINPLSYSEVMSDdPTLAWGVYDTV 143
P32701       115 GYTIAPAD------YKREPNVS------IYYYRD-TPFF-SGYKMTYMQRGNYVAVINPLFWSEVMSDdPTLQWGVYDTV 180 Escherichia col...
WP_023788440 120 SRSLGPPDf----mLPSDDEIS------VWVTKRlDDVGlPDINATIVAQEPFAIVVPR----------QDMKVEVSSWV 179 Hyphomicrobium ...
Q3ID42       119 PLPDNQPDyivnknKPSQIGIRfesdlyLLLFTK------RPLKVLIIRQGNYNLILKSEV-FDPKII-VTPNWQVFYKE 190 Pseudoalteromon...
Q9I1R7       122 PWGLSAPD------RVDAAGTR-------FWSEG-MPLPlQALPTGLVSRGNAVVFIAPHAYFDVDHPaPGISAAAVSSG 187 Pseudomonas aer...
Q1H3Q9       119 ELQALPPS------QYHIGAVR------FWSKII-NPAH-PQVISDIAAKGDIFVATSPAAFDRFSSPpSGIGAKVVTSD 184 Methylobacillus...
Q6D5E9       128 PIYLLPPN------LTTPDGVQ------LWTAMK-DVVD-PRITADMASLNGVVTITAAAAFRRFTQPpAEHSAMLLTRN 193 Pectobacterium ...
6_pfamImport  79 PIPLFPPD------LTTSTGTQ------LWTAME-RLVD-PRITADIASNGGVATITASAAFRRYSQPpQGYSATLINKN 144
Q31S15       114 -LDLGPVD------IVQPSGAK------LRRNVE-FDFA-KGLKFIVIERDSFAAVIQKDVPLDISKDiENISITTLSKS 178 Synechococcus e...
Q1LPF0       183 GTLIAVSTGADPGDM---------LNAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWPKLL 243 Cupriavidus metallidurans...
4_pfamImport 144 TNSFFSVSEQAnve-------qllPLLHRDESTFQQNNRFYTIAHSEKRPIAIIVSTDNARFYQNLYHQA 206
P32701       181 TKTFFSLSKEAsaa-------tfsPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFYNHL 243 Escherichia coli K-12
WP_023788440 180 EKELVLRAPDGRVWHldgarglfsHQPEADVADQRSNSALRQVVCGEDHAYCVAVGARFSDALLNWRmei 249 Hyphomicrobium nitrativorans
Q3ID42       191 SENLFHLAGQTGI-------------HNNIKSNDYLHYETNITCSNNNRNYCVALYLPWDVFFADNRQLF 247 Pseudoalteromonas halopla...
Q9I1R7       188 GDYIYHRFAwdd---------dqpLEALGRPGWPRFIGARQISLCDPTQDICVVSLLRERGLLGTEPgra 248 Pseudomonas aeruginosa
Q1H3Q9       185 GQYVFEKFGEADAIN-----------YVPAEQWRDQGSTLRFVRCDEKYALCVVSQKTDGGLFSREivlp 243 Methylobacillus flagellat...
Q6D5E9       194 LDHVYQKFGDidl--------pafRQTRQQNNAWLTMGKRQTFFCAQNRDICVLAQLDSAGILYHPWYVI 255 Pectobacterium atrosepticum
6_pfamImport 145 LDHPYQTFGSltl--------phkEDLSRLKNGWLTLGTRHFFTCSNSFDICVLAQFEDAGVIYRPWYVI 206
Q31S15       179 NPETLTARGFIdpk-------wisALNNQQESTFIDKGHIIAAVSSQRYFLGAVVATPVTGLASRTRAIA 241 Synechococcus elongatus P...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap