Conserved Protein Domain Family
Innate_immun

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pfam12782: Innate_immun 
Invertebrate innate immunity transcript family
The immune response of the purple sea urchin appears to be more complex than previously believed in that it uses immune-related gene families homologous to vertebrate Toll-like and NOD/NALP-like receptor families as well as C-type lectins and a rudimentary complement system. In addition, the species also produces this unusual family of mRNAs, also known as 185/333, which is strongly upregulated in response to pathogen challenge.
Statistics
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PSSM-Id: 372312
View PSSM: pfam12782
Aligned: 2 rows
Threshold Bit Score: 416.095
Threshold Setting Gi: 118421402
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ABK88364       1 MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEGRR 80  purple sea urchin
XP_030830666   1 MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEGRR 80  purple sea urchin
ABK88364      81 QNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEE 160 purple sea urchin
XP_030830666  81 QNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEE 160 purple sea urchin
ABK88364     161 QPFGQRNESSDEDGRPHPRHHGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGD 240 purple sea urchin
XP_030830666 161 QPFGQRNESSDEDGRPHPRHHGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGD 240 purple sea urchin
ABK88364     241 RPFGRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP 291 purple sea urchin
XP_030830666 241 RPFDRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP 291 purple sea urchin
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