Conserved Protein Domain Family
Myb_DNA-bind_3

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pfam12776: Myb_DNA-bind_3 
Myb/SANT-like DNA-binding domain
This presumed domain appears to be related to other Myb/SANT like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins.
Statistics
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PSSM-Id: 403855
View PSSM: pfam12776
Aligned: 32 rows
Threshold Bit Score: 94.6749
Threshold Setting Gi: 75147124
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9C771       176 WSSSSHEIFVDLLFTESLKENRpkpaRRNGYYAKETWNMMVESFNQ-KTGLRYTRKQLKNHWNITRDAWRRWCQAVGSPL 254 thale cress
Q0WRG4       168 WSPSSHELFVDLLFQEALKGNR-----PDSHYPKETWKMILETINQ-NTGKSFTRPQLKNHWDCTRKSWKIWCQVIGAPV 241 thale cress
O65915       165 WSPSSHAIVVDTCFQESLKGIRp--iKRNHLFTKESWKMILEKINR-ITGLGYTHKQLENHFTRTRTSWKHWCETIASPI 241 thale cress
Q9FFJ8       170 WSPSTHKLFLDLLVQETLKGNR-----PDTHFNKEGWKTILGTINE-NTGLGYTRPQLKNHWDCTRKAWKIWCQLVGASS 243 thale cress
Q9FFJ8         7 WEPEYHRVFVDLCVEQTMLGNK-----PGTHFSKEGWRNILISFQE-QTGAMYDRMQLKNHWDTMSRQWKIWRRLVETSF 80  thale cress
Q0WRG4         7 WEPEYHRVFVDLCVEQKMLGNQp------------GTQHILKPFLQ-RTGARFTRNQLKNHWDTMIKQWKIWCRLVQCSD 73  thale cress
Q9C771         8 WEPELHKVFVDLCVEQKMLGFRl-----------pGLNRIWESFVQ-NTGARFTRDQLKNHWDTMLRLWRAWCRLVECSE 75  thale cress
XP_002441990   6 WNDERTRLVCELFEEQVQAGNR----P-NTHLNNIGYRQVAAKFQQ-RTQLLYTKLQLKNKWDKFKNDYITWRKLLVVGK 79  sorghum
EES10957       7 WMMKYEKGLVDILHENNNSHYR-----TPNGWRTDGWRKIVRDFTVrYPEAKFSKPQIQEHETQLKKDYKLIKSVLQRDG 81  sorghum
EEE61139      22 WVAKYTKGLVDVLHEN-NISHY----RTQNGWRTDGWRKIVSEFNDrYPDAKFTKVQIQEHETQLKRDYRLVKLILQREG 96  Japanese rice
Q9C771       255 -LKWDANTKTFGATSEDWENY 274 thale cress
Q0WRG4       242 -MKWDATSRTFGATDEDWKNY 261 thale cress
O65915       242 -MKWDANTRKFGATEEDWDKY 261 thale cress
Q9FFJ8       244 -MKWDPESRSFGATEEEWRIY 263 thale cress
Q9FFJ8        81 -MNWNPESNRFRATDDDWANY 100 thale cress
Q0WRG4        74 -MQWDPQTNTFGANDQDWANY 93  thale cress
Q9C771        76 -MKWDPQTKKFGASTEVWTNY 95  thale cress
XP_002441990  80 gLPWDNAKGTFVADEEWWKKi 100 sorghum
EES10957      82 -VSWDQSASMVRATDEIWDEi 101 sorghum
EEE61139      97 -VTWDQNASMIRTTDEIWDEi 116 Japanese rice
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