Conserved Protein Domain Family
Zn_Tnp_IS1595

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pfam12760: Zn_Tnp_IS1595 
Transposase zinc-ribbon domain
This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc. It is likely a zinc-binding beta ribbon domain that could bind the DNA.
Statistics
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PSSM-Id: 403841
View PSSM: pfam12760
Aligned: 33 rows
Threshold Bit Score: 53.8951
Threshold Setting Gi: 123553167
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
vbi:Arad_7852  23 REEEHCRRLLESMVWRDG-----RVCPACGYK-RSIAIAGrdmgkrrarpGLYQCSSgdCRFQ 79  Agrobacterium radiobacter K84
XP_002638395   27 KDEFDDYLAAKGLFWKNRp------CPNCH---EPRSITHeisesgepirFKFECYKrkCKAS 80  Caenorhabditis briggsae
WP_015915854   17 LTEDEAYALFVDFRWADNgg--kPNCPRCGCL-EPYSIRr----------RRFRCSEaeCRAE 66  Agrobacterium vitis
Q21BE0         22 AGEEKAYETFCKLRWPATdg--ePVCPFCGGL-DAYRITTr---------RRFKCKA--CLRQ 70  Rhodopseudomonas palustris BisB18
BAF86363       22 MSDEEAHDAFRNIRWAATdg--kPVCPRCACA-ETLTYKTr---------KLYKCKA--CAHQ 70  Azorhizobium caulinodans ORS 571
WP_015939975   22 LTDEQAFQMLKAHRWGNPndindVCCPFCGIRhHAYFLQSr---------KRWTCKH--CKRN 73  Glaesserella parasuis
Q7VL69         22 ISEAEAFDLLCEARWGSKe---nVVCSKCGVQhKAYFISIr---------KQWRCKH--CHHT 70  [Haemophilus] ducreyi
jgi:HSM_0594   22 LADAEIQALLKKARWGTEd---eQVCPHCGVRhSAYFTNTr---------QQWQCKH--CHTR 70  Histophilus somni 2336
Q7VL65         22 LPDAEIFQRLKQARWGNAd---nFVCPHCHIRhLAYFISTr---------KQWQCKH--CQHR 70  [Haemophilus] ducreyi
Q7VL05         28 LSDVEILSLLKTARWGNAdnindIECPHCHVRhEAYFIKTr---------QQWQCKH--CCYR 79  [Haemophilus] ducreyi
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