Conserved Protein Domain Family
SUZ

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pfam12752: SUZ 
SUZ domain
The SUZ domain is a conserved RNA-binding domain found in eukaryotes and enriched in positively charged amino acids. It was first characterized in the C.elegans protein Szy-20 where it has been shown to bind RNA and allow their localization to the centrosome. Warning- the domain has a compositionally biased character.
Statistics
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PSSM-Id: 403836
View PSSM: pfam12752
Aligned: 146 rows
Threshold Bit Score: 37.3086
Threshold Setting Gi: 501753828
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGD76675     180 AEGSFVLMKRPANAKGRKHTRAARAQRAAGNGDAkdgakvagdgpngagekeddaaaegsddgatgrqRTLSEKEDEYQR 259 Salpingoeca ros...
EEC48357     221 KPRKMKIMKRSGKDVLQSQSSMESSSSNHLKLGKnglg---------------------------gnvSSLTEKEKAYAE 273 Phaeodactylum t...
EPS44009     104 YRPEMKILKRATNTNSPERDPNKPGSGTPKSDAEsdvevkke-------------------tpqekmeRERKEKEERYAK 164 Dactylellina ha...
CCX05747      76 YKPELTILKRDTASQASGSREVKRGGSSTKEERE----------------------------------KERKEKERRYKE 121 Pyronema omphal...
XP_018228190  65 YKPSLKILRRSAGQSSDSSVSNALPEKFASTEPE----------------------------------QGHREKEQRYKE 110 Pneumocystis ji...
CCG82637     117 KPRQVKIMKRVVDTPSSPPSRLSTPASQTVAEAKe---------------------------------KDKLEKEERYKA 163 Taphrina deform...
Q655L7       149 DTSTSVVVKRKDTDLEEAWKEDA-QENISAEISHlkndadlka----------------lqksvappaPSLKEREAAYRA 211 Japanese rice
XP_004984346 119 DDSTSVVITRNDTDFQKPWKLDV-QEDTSAKSSHlkdatdlkp----------------lkqsvvspaVSLKEREAAYRA 181 foxtail millet
XP_010649260 110 PTMSHQLLRRNEASPV---LKATEPSLQ----------------------------------------YSLEEREAAYLA 146 wine grape
Q5KPD0       176 PTQKFRIMQRAPAPGERPDLAASSDAQSTADGRAsk-------------------------------wKTLEEREAAYAA 224 Cryptococcus ne...
EGD76675     260 ARARIFRDGD 269 Salpingoeca rosetta
EEC48357     274 ARARIFSTDS 283 Phaeodactylum tricornutum CCAP 1055/1
EPS44009     165 ARERLFGPDN 174 Dactylellina haptotyla CBS 200.50
CCX05747     122 VKERIFAEGK 131 Pyronema omphalodes CBS 100304
XP_018228190 111 VRQKIFGTPT 120 Pneumocystis jirovecii RU7
CCG82637     164 ARARIFQGVE 173 Taphrina deformans PYCC 5710
Q655L7       212 ARERIFSAHD 221 Japanese rice
XP_004984346 182 ARERIFSGDD 191 foxtail millet
XP_010649260 147 ARERIFSMDE 156 wine grape
Q5KPD0       225 AREKIYGKGG 234 Cryptococcus neoformans
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