3HLZ


Conserved Protein Domain Family
DUF3806

?
pfam12713: DUF3806 
Click on image for an interactive view with Cn3D
Domain of unknown function (DUF3806)
This family represent the C-terminal domain of the structure. In two related Bacteroides species the gene lies immediately upstream from a putative ATP binding component of an ATP transporter and a putative histidinol phosphatase. The structure of this domain is strikingly similar to the N-terminal structure of 1ma7 whose C-terminal domain is a phage integrase, pfam00589.
Statistics
?
PSSM-Id: 403804
View PSSM: pfam12713
Aligned: 23 rows
Threshold Bit Score: 69.6007
Threshold Setting Gi: 239837902
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3HLZ_A          179 DLEKIQQVIDSGKISPKK---KDEWLAIGITVCAILTNEVe-GXEWKTLIDGNREVPVLEYQ-----GRTIDPXKIAWSK 249 Bacteroides ...
Q8NT80           39 DFETMVEQYKQAAASDPDidvTDIQQMWGIVVGEYLREKM--GMEWVVITDDYGTDLAILATapngdHVYSCPIIVVGKR 116 Corynebacter...
tigr:CJA_1974    81 DLDTLQRIIDRDLVKRED---YATQQAMGVALGQVFLADFpqTLEWKVYRDNVGRSRALCAKg---tQQCFFPVTMLSRR 154 Cellvibrio j...
tigr:TERTU_1917  76 DLALLQRIINEDIIKNNE---TQDLQALGAVLGDVFVHENd-KFQWVVYEDELGPTQAVCIKe---tSHCLFPITMLSRR 148 Teredinibact...
Q21JF9           80 DFRLLQRLIDEQVIPKTD---TQSLQAMGVILGDIYVSQVe-GLEWGVYEDELGRSHAVCAVn---tKECLFVTTMLSRR 152 Saccharophag...
jgi:Jden_2120   214 KYCTAWHTHSR----RNKwshTYVTNALGVALGDLLITYGd-DSAWMISEDSEVPTFAVRDNg---rSATFFPIDAVTRR 285 Jonesia deni...
jgi:Mlut_01340   43 DAVLARSQAEAEELDPEEl--AVLLDVVAVLLGEHLGARH--GMQWVTVADEEGPALALRDTl---sDAVVFPQPVVGQS 115 Micrococcus ...
CAS:CtCNB1_2186  56 gLAQLQPLLDRGLVSADN---LLLARGLGVVLGDALSCEMd-DMDWHMVSDDWGTDPVVRYRe---tSIQVGARDMVLKR 128 Comamonas th...
CCA93767         40 klaVIRANLAQGWVGPED---TWKLQSLGIAMGDALAQDL--MLDWVTVDDEYGRQPALNWPg---tSILCFPVTMISQR 111 Novosphingob...
WP_013819109     41 klmLLDAILKNKWIERNE---TLKLQCLGITFGDALAQKL--DLKWVAVEDEYGRDPALKVEg---tSIVTFPLTSISKR 112 Methylomonas...
3HLZ_A          250 VKAGQPCNIAEAY 262 Bacteroides thetaiotaomicron VPI-5482
Q8NT80          117 FSPDYEPGQLEFF 129 Corynebacterium glutamicum
tigr:CJA_1974   155 MEVGSKPDVKKIY 167 Cellvibrio japonicus Ueda107
tigr:TERTU_1917 149 MEVGLKPNVNKVY 161 Teredinibacter turnerae T7901
Q21JF9          153 IEVGVKPNVKRVY 165 Saccharophagus degradans 2-40
jgi:Jden_2120   286 WLKGY-LGWVPAF 297 Jonesia denitrificans DSM 20603
jgi:Mlut_01340  116 WNHQATGEWMGEY 128 Micrococcus luteus NCTC 2665
CAS:CtCNB1_2186 129 LEDGQSVDLLHLl 141 Comamonas thiooxydans
CCA93767        112 VEEGERIDIDMMY 124 Novosphingobium sp. PP1Y
WP_013819109    113 IENGEEVDVFKLf 125 Methylomonas methanica
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap