Conserved Protein Domain Family
Minor_capsid_3

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pfam12691: Minor_capsid_3 
Minor capsid protein from bacteriophage
This family is from one of three adjacent genes, all of which are involved in formation of the minor phage capsid.
Statistics
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PSSM-Id: 403785
View PSSM: pfam12691
Aligned: 38 rows
Threshold Bit Score: 50.5189
Threshold Setting Gi: 558610011
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
PRJNA289020:AOZ06_12805   9 HLHALGLVRYPPDAggdvavppgFIVEMPSTPDAC------------VLIRPRPGFPSGDM-SGYELAEQHIVVRaradA 75  Kibd...
WP_046442648              9 YLQKNGCGETGKDI---------FLARRPDQPVEC------------ITLYEYQGQPGNQI-AGAETPGLQVCVRt---K 63  Cata...
AHX01192                 12 YLIGLNIGTTSLSGtlp----liRVGMEPDIENRIl-----------LTVYDIPSVGSNPR-YQRDEPRIQIRVKakdeY 75  Nitr...
WP_040955361             17 LVDNKNL----------------FKNYYPDNPNNI------------VSIIDGGGYPPNRY-SPIREKTIEFKIRs---Q 64  Virg...
KSY29616                  9 LMQKAKIGTVGTDI---------FCHYMPANVKSGv-----------LLVTPNTGITIDHElKGFYHDSFTVIVRn---A 65  Citr...
SCW95652                  9 KIAAAGLGVPGESL---------FRGTMPAECTVGv-----------LFRMPLEGIPVDPHiVGWHKPRLQVIVRh---T 65  Ancy...
OFB61764                 10 MLIDAGLQHV-------------YIIDCPETGAA-------------VLITPYESIPYDGV--PVGEQRFQVYCAa---A 58  Syne...
WP_073153676              9 FIQNRYSYLM-------------YNNEFPAITNKNig---------lVRIFPTPTTNKEIN-----RLNAQILIKs---D 58  Sein...
SER25902                 11 LLSDAGLGVAGESL---------FLYEMPAECSQGl-----------LIKTPLTGIAINEElPGYFKFGLQVIVRa---M 67  bact...
CDC79729                  8 YLTKNGYDNV-------------YIDYMPAAETTKkainctewdntvAGINDGTGTH-----------YIQIQVRd---A 60  Clos...
PRJNA289020:AOZ06_12805  76 GYRAGYDQAKRIRDALHGtgetvwaAGTEHEVPIAWCNasdaePVWLG----RDEQNRPMWSVSIQTEALI 142 Kibdelosporan...
WP_046442648             64 RYPDGYAKLKQAHKALKEigfedgeLPEGIVVNDTRYFra--qPAMSGliqdRDENGNFLLKRSYYITKEE 132 Catabacter ho...
AHX01192                 76 GYEDAYAAQQAVKDSILGmnhveigGTRYVGVWQTSD------ISTLA----SDNKNRTILVASYRMVREY 136 Nitrincola ph...
WP_040955361             65 RYPDGVELGNKIFNLFHSkekyslgDFFITASYVSSE------LTYLY----ADSQNRKEFSLELVFQYQY 125 Virgibacillus...
KSY29616                 66 TITKAVAKANKIMDMFPVeetvsegVYFRLVR-----------PMSMPitypKNEGSLIEAGIPIEFAGYL 125 Citrobacter s...
SCW95652                 66 DPVQGEALANKVIKTLLVehpedhpATAERGRARITVFy----PAQLPiqfpMLEGNAIEWSLNFRTAFSV 132 Ancylobacter ...
OFB61764                 59 TYPASEALAWQAFRAIEDgavpecdREVVGLARAIQE------PFYLD----KDDYGRYIHEFNAAISAVW 119 Synergistes j...
WP_073153676             59 SMQKAEAKAWEIYEDLRIqthfligDTMIIYCSTNQ-------PEFIQ----SVDSGAFLYSVNLQLITDQ 118 Seinonella pe...
SER25902                 68 THGAGEDLAGKVIQVLTInqrriftNQDGSFAMQVNRLm----PETLPivypRADSDALEWSINFACSLVL 134 bacterium A52C2
CDC79729                 61 DYKSAYTTCKSIFELLDSgpdetiiDLTDDVFCIAR-------PRRAPliyaRDSLSITIYC-EIALWGKI 123 Clostridium s...
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