Conserved Protein Domain Family
Minor_capsid_3

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pfam12691: Minor_capsid_3 (This model is not part of the current CDD release)
Minor capsid protein from bacteriophage
This family is from one of three adjacent genes, all of which are involved in formation of the minor phage capsid.
Statistics
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PSSM-Id: 492825
Aligned: 29 rows
Threshold Bit Score: 49.3576
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_054289636   9 HLHALGLVRYPPDAggdva---vppgFIVEMPSTPDAC------------VLIRPRPGFPSGDM-------SGYELAEQH 66  Kibdelosporangi...
WP_015761305  12 RLKEAGIAD-----------------VVTTLPDSSKHPe-----------AVVVSLGVASRQTRyh---dgEVATPLRLT 60  Eggerthella lenta
WP_015076726  10 FLTDNLVLTSIND-------------RILFEPSFNNDKd-----------ISILDAPSSNDSRYyn----tDTTYHLVVQ 61  Carnobacterium ...
WP_073153676   9 FIQNRYSYLM----------------YNNEFPAITNKNig---------lVRIFPTPTTNKEIN-----------RLNAQ 52  Seinonella pept...
Q8Y4Y7        12 AIENNVDLKDMKLR------------TAILKPES----------------IALLLTPNNDKQGYq------DGSYERSFS 57  Listeria monocy...
KIH70071       9 HINANTDLNVSMNIrte------dsvLLRIAPSSPDPFnm-----------------------------dmQHSKNFSFQ 53 
WP_013623582  10 YLKTYGGMDMRPISevltdqtrenasSYALAPSGNGKTvtdivgnktfenNYVFYAKEAVADEI---------------- 73  Syntrophobotulu...
1_pfamImport   1 YINNFKQLPLKA--------------RLDYFKDNQDDLv-----------VNAIPGGTIEREFMd-----gTREVSLPFE 50 
2_pfamImport   1 FVEGLDLGIKP---------------RLDYLTRQEDLA------------IYPMPGGKVNNEYMd-----gTREISLPFE 48 
KLU68056      10 LVSGLGFTDDSSV-------------YMGKLDAKQDQS------------IGVYNLKRSAPYTVaiggkdkESYGTKQIS 64 
WP_054289636  67 IVVRarAd-AGYRAGYDQAKRIRDALHGTGETVWAAGTEHEVPIAWCNasd----aePVWLGRDEQNRPMWSVSIQTEAL 141 Kibdelosporangi...
WP_015761305  61 VIAK--R--RSELDAMGDAMEAERILRTRPLDSRNGSYRVASVETAF----------PRPIPWDESGFFVWAFDATINIT 126 Eggerthella lenta
WP_015076726  62 ILVK--N--TNQHTAYQESMQIYQLLDMLPIMKDGKLLTIKSENSSFIfnssegytlPRKIEKTEHDAYIYSMLIKASIL 137 Carnobacterium ...
WP_073153676  53 ILIK--S--DSMQKAEAKAWEIYEDLRIQTHFLIGDTMIIYCSTNQ-----------PEFIQSVDSGAFLYSVNLQLITD 117 Seinonella pept...
Q8Y4Y7        58 FNLNgsS--KQEMKVLNVLNAITAYFDNTELESIQSLNNSFVLEDKETts------vPNLVSASDDGTFIYSASFKIKLY 129 Listeria monocy...
KIH70071      54 ILTK--H--SNQFLAYSWIEQISQLLHGLSYSDIQDDDYNLIVLEETTs--------PNFVETNSSNQHIYTAIYNAEII 121
WP_013623582  74 ------DrqENYDFLEDLSDWLDEQNDAGNLPELPGQYEAESLEVSN----------VLLFDIDEDGTGLYQVQIKLILT 137 Syntrophobotulu...
1_pfamImport  51 IAVK--S--KSNQLASDVIWFLNGELSVFDIDLPSTDDSYTFLSLSVGk--------PGINGKDEHGYFVYTLQLQAKLE 118
2_pfamImport  49 IAIK--T--KNQELASTVMWTINSALSNFDLKLPSLNHSYTFISLDVEk--------PFLNDLSDQGFYIYVLDITAHLE 116
KLU68056      65 ILIHw-N--RSMRDTEAVAAELFDKLAAMREVRINEKQIKFIHPLVDQ---------PVDVGTDDNGIYEMVIEIELIYE 132
WP_054289636 142 I 142 Kibdelosporangium phytohabitans
WP_015761305 127 R 127 Eggerthella lenta
WP_015076726 138 I 138 Carnobacterium maltaromaticum
WP_073153676 118 Q 118 Seinonella peptonophila
Q8Y4Y7       130 I 130 Listeria monocytogenes
KIH70071     122 R 122
WP_013623582 138 K 138 Syntrophobotulus glycolicus
1_pfamImport 119 I 119
2_pfamImport 117 I 117
KLU68056     133 R 133
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