3L0A


Conserved Protein Domain Family
DUF3799

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pfam12684: DUF3799 (492819 is an unknown moldel)
PDDEXK-like domain of unknown function (DUF3799)
This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 265 and 420 amino acids in length. It appears that these proteins are distantly related to the PDDEXK superfamily and so these domains are likely to be nucleases. This family has a C-terminal cysteine cluster similar to that found in pfam01930.
Statistics
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PSSM-Id: 492819
Aligned: 22 rows
Threshold Bit Score: 209.093
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L0A_A        20 SVSGYKDFAGtygkxpCEFYGXEKLNGRWED-EKSTALLVGSYVDSY-FEGSL--DQFKK----------DNPEIFTQ-- 83  Agathobacter re...
WP_004630177  48 SSTQLKSILK------TPKHFLAAVQGAG---KDKQVLEFGRLAHMAvFEPWRfeDMVLPydgefdrrlrNCKTFIADhp 118 Ralstonia
Q99YZ3        22 SISQYKRFRE------CEARGLAELQGNWTDtRDNTALLVGNYVHSY-FESKEahEEFKA----------QNGSEMIStr 84  Streptococcus p...
Q830E7        23 SVSQYKKFLE------CEAAALAKLKGEWTPeNDPKALLVGNYVHSY-FESPEihEAFKE----------ENKSKMFSsr 85  Enterococcus fa...
WP_023519293  27 STSQYKLFLN------CEAAALAKLKGDWQPiFDPKALLVGNYVHSY-FESKEvhEAFKE----------ENKSKMFSsr 89  Enterococcus mu...
3_pfamImport   1 SVSQYKQFRE------CEAAALAKLKGDWEPtSNPVALLVGNYVHSF-FERADvhDAFIE----------ENREAMFSkr 63 
Q832T7        26 SVSQYKNFNE------CEAATIARLKKIWLPcSDPKALLVGNYVHSY-FESSKihDLFKK----------ENKDKMFSsr 88  Enterococcus fa...
WP_012656817  19 SVSTFKKFSQ------CEAAAMAFLTGEYKQ-SSSPAMLVGNFVHSA-FDSEEehEKFVN----------EHSKVIFNr- 79  Macrococcoides ...
2_pfamImport   1 SATWFKKFLA------CEAEALAELTGKWQPvRDAKALVVGNWLHSY-FESKQahEKFKD----------EHPESISKrg 63 
WP_003668035  19 SVSLFKDFEK------CEARALAKLKEDWQPvSSPVPLLVGNYVHSY-FESAKshQDFIE----------ANKKELMTrp 81  Limosilactobaci...
3L0A_A        84 -----KGELKAN-FKQAEEIIARIERDEYFXK----YXS-G-QKQVIXTGELF-GAKWKIKXDSYIPg-VAIVDLKVXA- 148 Agathobacter re...
WP_004630177 119 n----hivIGQDkFDALLSMREAVRAHHFRGRtlgeWFDeGeQEKAIYFVERVtNVKCRIKVDNLHP--EFIFDLKSTV- 191 Ralstonia
Q99YZ3        85 g--ttKGQLKKD-YLVAEQMIEALKNDSNFMA----IYQ-G-EKEAAITGFLG-EVEFKGKIDCLNVerGYFVDIKTTKg 154 Streptococcus p...
Q830E7        86 ---kpFGLLKD--FQIAEQMIERLKQEEAFLN----IYQ-G-EKEVIVTGEIG-GAMWKGKIDCLNLeeKYFVDIKTTK- 152 Enterococcus fa...
WP_023519293  90 ---kpFGLLKD--FQIAEQMIERLKQEEAFIN----IYQ-G-EKETIVTGELF-GTTWKGKIDCLNVeeGYFVDIKTTK- 156 Enterococcus mu...
3_pfamImport  64 ---kpYGLLKD--FQIADQMIERLEKEPAFMN----LYQ-G-EKEVIVTGELY-GVEWKGKIDCLNVeeGYFVDIKTTK- 130
Q832T7        89 ---kpYGLLKD--FQIAEQMIQRLKEEPAFMN----LYK-G-EKEVIVTGQIE-NVNWKGKIDCLNLedGYFVDIKTTK- 155 Enterococcus fa...
WP_012656817  80 -----KGDYYKD-YAVAKQMIEALKNDELAMF----ALE-G-EKEVILTGELF-GIQWKCRIDSINHerKTFADIKTTQ- 145 Macrococcoides ...
2_pfamImport  64 ---ptKGQLKSD-FKVANAMIQSLTNDHDFNL----LYQ-G-DKEVIVTGEIG-GYPWKGKIDCLNLkqGYFVDLKTTA- 131
WP_003668035  82 tktnpNGHLRAE-FKGANSMIQTLQADDMFNY----FYApG-DKEVIVTGEID-GYLWKGKIDSLVLdkGYFCDLKTVD- 153 Limosilactobaci...
3L0A_A       149 SITDLKWVKDIGyldf-vryWGYDIQGAVYQEIVRQNTGEKLPFFIAGATKQTEPDIRIIHV----TDNYLQEALHXVEX 223 Agathobacter re...
WP_004630177 192 DVRPAAFNGSVHa-------YHYDLSAFMYQTGVQYFTGEERPFVFIAVEKEAPYSVMTYTA----GDSLLDNGAQKFED 260 Ralstonia
Q99YZ3       155 PIDDTIWNREErvrw--feaYGYILQMAAYKTMLEAKYNKPFEPIIYAVTKETPPDTRAIRIq---NVDAMQIELDSLAQ 229 Streptococcus p...
Q830E7       153 DMHEKKWDERLNrkanfierFGYVLQMAVYCELLRQQYDKIFLPLIAAVSKQTPSEAKLITL----SEEKMIYELEELKE 228 Enterococcus fa...
WP_023519293 157 DMHERKWNENYGsretfivnFGYALQMAIYQELLLQQYGKTFTPIIAAVSKQTPSEARLITI----DQDKMSYELIMLKE 232 Enterococcus mu...
3_pfamImport 131 DIHDRKWNTNYNeratfienYGYLLQMGVYKELLKQQYGKEFVPIIAAVSKQTPSEARLITL----DEDKMHFEMILLEE 206
Q832T7       156 DIHERKWNDSYAerctfienYGYVLQMAVYKELLSQKYNREFVPIIAAVSKQTPSEVKLITL----DEDKMHFEMIQLKE 231 Enterococcus fa...
WP_012656817 146 DLHKRIWSDKHGgyvsfveaYDYIFQMYIYRELIFQKFGEYYEPYIVAVTKETPSNKAVIEIa--hDRYTFESSFAEVTM 223 Macrococcoides ...
2_pfamImport 132 DIYKVYWNPETRekesfvyaYNYPLQMAVYQELIKQQFGVTCKPYIVAVSKQDPPDKQAIDL----PEYRLTNAMNQVLE 207
WP_003668035 154 DIHKGHWNTYEHryvpfiqdREYDLQMAVYRELIKQTFGKKCQPLIFAISKQTPPDKMAIDFngvdDDYQMQADLDKVKE 233 Limosilactobaci...
3L0A_A       224 NXPRILRVKNGEVEPDRCELCDCCRHN 250 Agathobacter rectalis ATCC 33656
WP_004630177 261 GLNRLNHARAHDSWPGY---------A 278 Ralstonia
Q99YZ3       230 SIKRLDDVKKGIEKPKPCGKCEYCRQN 256 Streptococcus pyogenes serotype M1
Q830E7       229 NIEHVVRVKNGEEEPVSCGICEYCRGH 255 Enterococcus faecalis
WP_023519293 233 NIERIVKVKNGEERPIPCGTCEYCRGN 259 Enterococcus mundtii
3_pfamImport 207 NIERVQKVKMGQEKSEMCGKCEYCREY 233
Q832T7       232 NIEHIIKVKNGEEKPTLCGRCEYCRGQ 258 Enterococcus faecalis
WP_012656817 224 K-DDILPLLKKERQPDRCEKCEYCRQT 249 Macrococcoides caseolyticum
2_pfamImport 208 SQQHLQDIIKGEADPIQCGHCAYCRST 234
WP_003668035 234 LQPHFWKVMTGEEEPVHCGKCDYCRET 260 Limosilactobacillus reuteri
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