3L0A


Conserved Protein Domain Family
DUF3799

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pfam12684: DUF3799 
PDDEXK-like domain of unknown function (DUF3799)
This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 265 and 420 amino acids in length. It appears that these proteins are distantly related to the PDDEXK superfamily and so these domains are likely to be nucleases. This family has a C-terminal cysteine cluster similar to that found in pfam01930.
Statistics
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PSSM-Id: 492819
Aligned: 23 rows
Threshold Bit Score: 209.093
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L0A_A        20 SVSGYKDFAGtygkxpCEFYGXEKLNGRWED-EKSTALLVGSYVDSYFEGSL--DQFKK-------DNPEIFTQ------ 83  Agathobacter re...
Q99YZ3        22 SISQYKRFRE------CEARGLAELQGNWTDtRDNTALLVGNYVHSYFESKEahEEFKA-------QNGSEMIStrg--t 86  Streptococcus p...
Q830E7        23 SVSQYKKFLE------CEAAALAKLKGEWTPeNDPKALLVGNYVHSYFESPEihEAFKE-------ENKSKMFSsr---k 86  Enterococcus fa...
BAO06323      27 STSQYKLFLN------CEAAALAKLKGDWQPiFDPKALLVGNYVHSYFESKEvhEAFKE-------ENKSKMFSsr---k 90 
WP_014124229  24 SVSQYKQFRE------CEAAALAKLKGDWEPtSNPVALLVGNYVHSFFERADvhDAFIE-------ENREAMFSkr---k 87  Tetragenococcus...
Q832T7        26 SVSQYKNFNE------CEAATIARLKKIWLPcSDPKALLVGNYVHSYFESSKihDLFKK-------ENKDKMFSsr---k 89  Enterococcus fa...
WP_012656817  19 SVSTFKKFSQ------CEAAAMAFLTGEYKQ-SSSPAMLVGNFVHSAFDSEEehEKFVN-------EHSKVIFNr----- 79  Macrococcoides ...
WP_011101093  38 SATWFKKFLA------CEAEALAELTGKWQPvRDAKALVVGNWLHSYFESKQahEKFKD-------EHPESISKrg---p 101 Lactiplantibaci...
1_pfamImport   1 SVSLFKDFEK------CEARALAKLKEDWQPvSSPVPLLVGNYVHSYFESAKshQDFIE-------ANKKELMTrptktn 67 
WP_012391054  20 SFSLYKDFTK------CEAAALAKLNEDWQPtSSPTPLLVGNYIHSYFESPEahQAWLDrsetgakTNRELMMTkptktd 93  Limosilactobaci...
3L0A_A        84 -KGELKANFKQAEEIIARIERDEYFXKYXS-GQKQVIXTGELFGAKWKIKXDSYIPg-VAIVDLKVXA-SITDLKWVKDI 159 Agathobacter re...
Q99YZ3        87 tKGQLKKDYLVAEQMIEALKNDSNFMAIYQ-GEKEAAITGFLGEVEFKGKIDCLNVerGYFVDIKTTKgPIDDTIWNREE 165 Streptococcus p...
Q830E7        87 pFGLLKD-FQIAEQMIERLKQEEAFLNIYQ-GEKEVIVTGEIGGAMWKGKIDCLNLeeKYFVDIKTTK-DMHEKKWDERL 163 Enterococcus fa...
BAO06323      91 pFGLLKD-FQIAEQMIERLKQEEAFINIYQ-GEKETIVTGELFGTTWKGKIDCLNVeeGYFVDIKTTK-DMHERKWNENY 167
WP_014124229  88 pYGLLKD-FQIADQMIERLEKEPAFMNLYQ-GEKEVIVTGELYGVEWKGKIDCLNVeeGYFVDIKTTK-DIHDRKWNTNY 164 Tetragenococcus...
Q832T7        90 pYGLLKD-FQIAEQMIQRLKEEPAFMNLYK-GEKEVIVTGQIENVNWKGKIDCLNLedGYFVDIKTTK-DIHERKWNDSY 166 Enterococcus fa...
WP_012656817  80 -KGDYYKDYAVAKQMIEALKNDELAMFALE-GEKEVILTGELFGIQWKCRIDSINHerKTFADIKTTQ-DLHKRIWSDKH 156 Macrococcoides ...
WP_011101093 102 tKGQLKSDFKVANAMIQSLTNDHDFNLLYQ-GDKEVIVTGEIGGYPWKGKIDCLNLkqGYFVDLKTTA-DIYKVYWNPET 179 Lactiplantibaci...
1_pfamImport  68 pNGHLRAEFKGANSMIQTLQADDMFNYFYApGDKEVIVTGEIDGYLWKGKIDSLVLdkGYFCDLKTVD-DIHKGHWNTYE 146
WP_012391054  94 pDGHLRAEFKLADQMIQTLKNDKLFNFVYMpGEKEVIVTGKIGDHEWKGKIDSLVLnkGYFCDLKMVD-DIHKKHWDAKN 172 Limosilactobaci...
3L0A_A       160 GYldf-vryWGYDIQGAVYQEIVRQNTGEKLPFFIAGATKQTEPDIRIIHV----TDNYLQEALHXVEXNXPRILRVKNG 234 Agathobacter re...
Q99YZ3       166 rvrw--feaYGYILQMAAYKTMLEAKYNKPFEPIIYAVTKETPPDTRAIRIq---NVDAMQIELDSLAQSIKRLDDVKKG 240 Streptococcus p...
Q830E7       164 NRkanfierFGYVLQMAVYCELLRQQYDKIFLPLIAAVSKQTPSEAKLITL----SEEKMIYELEELKENIEHVVRVKNG 239 Enterococcus fa...
BAO06323     168 GSretfivnFGYALQMAIYQELLLQQYGKTFTPIIAAVSKQTPSEARLITI----DQDKMSYELIMLKENIERIVKVKNG 243
WP_014124229 165 NEratfienYGYLLQMGVYKELLKQQYGKEFVPIIAAVSKQTPSEARLITL----DEDKMHFEMILLEENIERVQKVKMG 240 Tetragenococcus...
Q832T7       167 AErctfienYGYVLQMAVYKELLSQKYNREFVPIIAAVSKQTPSEVKLITL----DEDKMHFEMIQLKENIEHIIKVKNG 242 Enterococcus fa...
WP_012656817 157 GGyvsfveaYDYIFQMYIYRELIFQKFGEYYEPYIVAVTKETPSNKAVIEIa--hDRYTFESSFAEVTMK-DDILPLLKK 233 Macrococcoides ...
WP_011101093 180 REkesfvyaYNYPLQMAVYQELIKQQFGVTCKPYIVAVSKQDPPDKQAIDL----PEYRLTNAMNQVLESQQHLQDIIKG 255 Lactiplantibaci...
1_pfamImport 147 HRyvpfiqdREYDLQMAVYRELIKQTFGKKCQPLIFAISKQTPPDKMAIDFngvdDDYQMQADLDKVKELQPHFWKVMTG 226
WP_012391054 173 HQwtnfiedRGYIMQAAIYKELIKQSFNKNCQPFIFSVSKQTPPDKGAFDFqg-dTKFLMQEAIDEIKENQERYWQIMTG 251 Limosilactobaci...
3L0A_A       235 EVEPDRCELCDCCRHN 250 Agathobacter rectalis ATCC 33656
Q99YZ3       241 IEKPKPCGKCEYCRQN 256 Streptococcus pyogenes serotype M1
Q830E7       240 EEEPVSCGICEYCRGH 255 Enterococcus faecalis
BAO06323     244 EERPIPCGTCEYCRGN 259
WP_014124229 241 QEKSEMCGKCEYCREY 256 Tetragenococcus halophilus
Q832T7       243 EEKPTLCGRCEYCRGQ 258 Enterococcus faecalis
WP_012656817 234 ERQPDRCEKCEYCRQT 249 Macrococcoides caseolyticum
WP_011101093 256 EADPIQCGHCAYCRST 271 Lactiplantibacillus plantarum
1_pfamImport 227 EEEPVHCGKCDYCRET 242
WP_012391054 252 EVAPKHCGKCEFFRLT 267 Limosilactobacillus fermentum
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