6LBT


Conserved Protein Domain Family
Stn1_C

?
pfam12659: Stn1_C (This model is not part of the current CDD release)
Telomere capping C-terminal wHTH
This domain consists of tandem winged helix-turn-helix motifs. Stn1 and Ten1 are DNA-binding proteins with specificity for telomeric DNA substrates and both protect chromosome termini from unregulated resection and regulate telomere length. Stn1 complexes with Ten1 and Cdc13 to function as a telomere-specific replication protein A (RPA)-like complex. These three interacting proteins associate with the telomeric overhang in budding yeast, whereas a single protein known as Pot1 (protection of telomeres-1) performs this function in fission yeast, and a two-subunit complex consisting of POT1 and TPP1 associates with telomeric ssDNA in humans. S.pombe has Stn1- and Ten1-like proteins that are essential for chromosome end protection. Stn1 orthologues exist in all species that have Pot1, whereas Ten1-like proteins can be found in all fungi. Fission yeast Stn1 and Ten1 localise at telomeres in a manner that correlates with the length of the ssDNA overhang, suggesting that they specifically associate with the telomeric ssDNA. Two separate protein complexes are required for chromosome end protection in fission yeast. Protection of telomeres by multiple proteins with OB-fold domains is conserved in eukaryotic evolution.
Statistics
?
PSSM-Id: 520382
Aligned: 13 rows
Threshold Bit Score: 137.056
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6LBT_C        13 EILGVLIEKSMESKVC-------------KIYEPLLSIN--LGPGGEATdLK----TEPVLHLKFYETFLAQLAEMAIIT 73  Kluyveromyces l...
XP_003678691 304 QVLKHLLSCPDRTISIvelyq---msqiyDLISNISAIR--FNRQNIML-VK----SLEQLKTETFFRLIDYLVTSGLLK 373
XP_056086740 318 SLMLILLELRVEEISSfdlye---lrevrSIVTSLASFH--FQQQNVII-MK----SLDTCENETFQNLVDGLANLGLIE 387
XP_002556189 293 HVLDHLLTQNRVEVSTlntfr---spgplRVLRRVAAQR--ARRQ-----AR----PVDEVASSLFADVLQRLARAGLIS 358
Q6CTL1       282 EILGVLIEKSMESKVCkiyep---------------llsinLGPGGEATdLK----TEPVLHLKFYETFLAQLAEMAIIT 342 Kluyveromyces l...
XP_003647089 357 ALLEWFLANSSLAEVPylepmd-kvdvlsQILDSIATVR--FHKHPESGl------SIGGIKQKLYADVIANFASMGVIS 427
Q74ZP7       267 ALLAYFFDCAGQQQVPyrrpla-evlvlsQILHAVALTR--RGEHDAFSa------GLEKTKALLYDSVLAQFCTMGVLS 337 Eremothecium go...
XP_022465948 268 FFVHTLAQTSTTNIPTvglfe---meslrRTLMFYSNNK--LQNQTLKR-CKleyySQDQLISMIFINELNHLQALHLIR 341
Q6FM89       278 KLFIAIYLIPEEECTIndlar---digitSVLKGFLDGQghISNDDMQI---------------ILQEYLSQLITGDVLV 339 [Candida] glabrata
XP_001646308 268 AVLKILLNEPKDRISTvqlyq---lpkfmSIINQISINR--IRKENISH--K----GLEDIKIEVFYKLLKTFSKNGLIK 336
XP_003667754 356 FLLRYLITLPVNSITMidlyq---isefkSKLEQLSIFE--FQKQSLSN-IK----SFEEIKSEQFINYIKSLVASTVVE 425
XP_003674869 310 LLLQNLMILSTQSISLvelyq---lpdfrSCIEAITIQQ--FQQQSLSD-LK----TVEEIKAGIFYDYLERLTKMGLIT 379
XP_003683719 366 ILLKILLFDCEDLVSTdyllkllklqkldGNTENITIPKliFAENNDTF-SN----KFSHYEFTLLKEYLVDLQKIELIR 440
6LBT_C        74 L---DSFTINMTNLHNCYRYIITRFQSLINVQIPQITIKYSEIRNFCKL-PLLS--KKLILQMCKHFLNTT----HIGNL 143 Kluyveromyces l...
XP_003678691 374 Yv--NRNVIDLMPLKSLYAYCTKRLRALIKMQCYLGTIEVKIIRQKLSL-PSLS--QKAIIDTFKEALRVAay-gHPNLF 447
XP_056086740 388 LrgvASKVLDLLPLRKLFDYAQKRILVLVKLQCYTGTIELHHVQEKLHL-PCIT--INGIISVFKEGLKQTan-qYPQVL 463
XP_002556189 359 Vf-aQGRILNLRVLKNCDDYVTQRIAALVELRSYTGKIDFRRACDLLGL-ARSAplERLLVDLHKRALRRLaa-aSDTPL 435
Q6CTL1       343 Ld---SFTINMTNLHNCYRYIITRFQSLINVQIPQITIKYSEIRNFCKL-PLLS--KKLILQMCKHFLNTT----HIGNL 412 Kluyveromyces l...
XP_003647089 428 Vi---NQQYIIPAIGSLKQYINSRFETWTKLEIISGKIIYKQVREISGL-TQMT--TMFIIMLVKVLLRKYls-kMVTSV 500
Q74ZP7       338 LegsDQIQLHLLPVK---EHIVARIDTWLKLHVRAGKLLYHQVRSTCGL-PQMS--APFIVNLTKVLLRQHis-qRTELV 410 Eremothecium go...
XP_022465948 342 Ie-dHNNQIMAKPLQNLYHYARGKIRLWIKLRTGVGIVNNVQIIDRLTLdREIS--SNVIALVFKLVMDDTvstlSQNFI 418
Q6FM89       340 It--ARNRVSLKKLHALKAYTQKRINLLLKIQALLGTVRYQDVLQSTSM--AIP--AETIIDAFKESLRTIda------g 407 [Candida] glabrata
XP_001646308 337 Yi--DETEIDLSLLHKIYKNFQRQVSVLILLRCTTGNIDLTKLKQLPDI-NSSS--NIEFADILQESIEKIak-sSPNLL 410
XP_003667754 426 Lt-sNDNVIDLSILKKVSKYCNERLNISIKLQNLSISIDYKYIKQKLSL-KQFK--NMMIIEIFKENIKIFtm-nTSSII 500
XP_003674869 380 Is-tHGNLIDLKSLKQLSRYCQRRLSTLIRLQSLCINVDYNFIRQKLKI-SNLT--KLAIISIYKETIKVFik-aSPSLL 454
XP_003683719 441 Vn-nAGDTMDLNNLHRLFSYCHKHCKLFINLKYNTVTINHSLIKKKLDI-HKVP--DMVIINIYRESIKNFvn-qNPRLL 515
6LBT_C       144 IDWWVDPTSEERYK-------VFFTY 162 Kluyveromyces lactis
XP_003678691 448 TGWWIEINSEKESA-------IHLEY 466
XP_056086740 464 KKWWIDLNSKNGSEdqrngflLHLEY 489
XP_002556189 436 QSWWIELAGPAAAF-------VHFEY 454
Q6CTL1       413 IDWWVDPTSEERYK-------VFFTY 431 Kluyveromyces lactis
XP_003647089 501 DNWYLDAKSEVQGYi-----iVRFYY 521
Q74ZP7       411 DSWFLDAKSEERGYl-----lVRFNY 431 Eremothecium gossypii
XP_022465948 419 RSWFIETKNDNTSW-------VHISY 437
Q6FM89       408 VAWFIETHQHSFT--------IHFTY 425 [Candida] glabrata
XP_001646308 411 KIWRIKKIDKNNYK-------LNFVY 429
XP_003667754 501 KNWYIDLKNEKIAI-------VYLEY 519
XP_003674869 455 KSWWIDLKNDTIAL-------IHLEY 473
XP_003683719 516 KSWFIEVNANRSSI-------LYLKY 534
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap