Conserved Protein Domain Family
RNHCP

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pfam12647: RNHCP (This model is not part of the current CDD release)
RNHCP domain
This family of proteins is found in bacteria. Proteins in this family are typically between 94 and 143 amino acids in length. There is a conserved RNHCP sequence motif.
Statistics
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PSSM-Id: 520377
Aligned: 43 rows
Threshold Bit Score: 85.7843
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014739048       17 NTDFVCGHCSTLVPANtdGH-YRNHCPWCLWSLHVDElpGDRASDCRALMepVGLVEKSGKGWQVVHRCTRCGHRQPNRL 95  Modestobac...
Q5YVD1             19 TDTFTCMRCGLTVATLapDHsRRNHCPSCLHSRHTVDhvDGGASDCGARMapLSIAVSRTGEWALVHRCTRCHELALHPV 98  Nocardia f...
CCH32443          119 METFACVWCGLTVLASapDGvRRNHCPSCLNSRHVHDhvEGGPSECQARMspISIAVLRNGDWKVIHRCTRCDELTANRV 198
WP_025355458       12 TETFTCVRCGLTVTKFgpDGgRRNHCPSCLHSQHVHDhvAGGLSDCQSRMipISIAVLRNGDWMIIHRCTRCDELTSNAI 91  Kutzneria
WP_012015621       18 iGTFSCIRCGLTVPAAagDGtRRNHCPSCLHSQHVHDhvEGGPSDCQGRMspIAIAVLRTGDWMVIHRCIRCDELTSNPV 97  Salinispor...
WP_013151168       14 TGAFACVRCGLSVSRLgpDGePRDHCPSCLSSRHVLDrvGGGASDCGGRMapISVAVPRGGSWTLIHRCGVCDEMSESAV 93  Nocardiopsis
WP_014912565       13 TSTFTCLRCGTSVSVLspDGaERDHCPSCLTGRHVHErrSGGRSDCGGPMgpIAV-VSDHDRWRLVHRCAHCDGLSEGDV 91  Nocardiops...
jgi:FsymDg_4426    20 AEDFRCLACGTPVR----GDgYTNHCPRCLWSRHVDVnpGDRAADCAGSMrpVAVEVR-AGRTILLHRCEACGHQRRNRI 94 
Q2J4Q5             16 TEDFVCLVCATAVR----GDgYTNHCPSCLSSRHVDVnpGDRAARCGAVMrpVAVESR-THDLVITHVCERCGHRRRNRS 90  Frankia ca...
jgi:FraEuI1c_0144  10 TEDFSCLVCGTAVR----GDgYTNHCPRCLWSRHVDVapGDRAAGCGGLMrpVAIEAR-AHDVVLTHVCESCGHRRRNRT 84 
WP_014739048       96 vrdgaAPD 103 Modestobacter italicus
Q5YVD1             99 -----CGD 101 Nocardia farcinica
CCH32443          199 -----HGD 201
WP_025355458       92 -----CGD 94  Kutzneria
WP_012015621       98 -----CAD 100 Salinispora tropica
WP_013151168       94 -----SPD 96  Nocardiopsis
WP_014912565       92 -----ASD 94  Nocardiopsis alba
jgi:FsymDg_4426    95 -----SPA 97 
Q2J4Q5             91 -----VPA 93  Frankia casuarinae
jgi:FraEuI1c_0144  85 -----APA 87 
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